RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 H7C423 109 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 FCN1O00602 326 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 RS1O15537 224 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 MED7O43513 233 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 RHBDL1O75783 438 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 SLC2A3P11169 496 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 IMPDH1P20839 514 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 IDSP22304 550 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 HMGCLP35914 325 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 ALDH3B2P48448 385 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 TDO2P48775 406 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 CDH4P55283 916 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 OC90Q02509 493 aaPredicted RBP4.34□□□□□ -1.71
TUBD1-208ENST00000588009 CRMP1Q14194 572 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 LTB4RQ15722 352 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 MICAQ29983 383 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 SLC25A52Q3SY17 297 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 NHLRC3Q5JS37 347 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 BEND3Q5T5X7 828 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 VITQ6UXI7 678 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 SLC22A18ASQ8N1D0 253 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 KIR3DL3Q8N743 410 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 MFSD9Q8NBP5 474 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 OR51G2Q8NGK0 314 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 ADAMTS16Q8TE57 1224 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 TRUB1Q8WWH5 349 aaKnown RBP4.34□□□□□ -1.71
TUBD1-208ENST00000588009 TMEM80Q96HE8 168 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 TCEANC2Q96MN5 208 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 CITED1Q99966 193 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 TRIM51Q9BSJ1 452 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 PARD6BQ9BYG5 372 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 ROPN1BQ9BZX4 212 aaPredicted RBP4.34□□□□□ -1.71
TUBD1-208ENST00000588009 ADNPQ9H2P0 1102 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 GLIPR2Q9H4G4 154 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 TIGARQ9NQ88 270 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 POLE4Q9NR33 117 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 SCML2Q9UQR0 700 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 USP16Q9Y5T5 823 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 FRMPD3Q5JV73 1810 aa4.34□□□□□ -1.71
TUBD1-208ENST00000588009 PDE4DIPQ5VU43 2346 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 FRMPD1Q5SYB0 1578 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 ARHGEF12Q9NZN5 1544 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 RTEL1-TNFRSF6BF6WH68 1400 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 FHOD3Q2V2M9 1422 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 AKNAQ7Z591 1439 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 IGHV2-70DA0A0C4DH43 119 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.33□□□□□ -1.72
TUBD1-208ENST00000588009 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.33□□□□□ -1.72
TUBD1-208ENST00000588009 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 G3V3Y1 287 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 LINC01565O15544 149 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 TSPAN12O95859 305 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 H2AFZP0C0S5 128 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 CYP2B6P20813 491 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 FNTAP49354 379 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 EFNB2P52799 333 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 VLDLRP98155 873 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 SSX2Q16385 188 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 DPYSL2Q16555 572 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 PPP1R3AQ16821 1122 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 PDZK1Q5T2W1 519 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 PRAMEF5Q5TYX0 476 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 PRAMEF6Q5VXH4 476 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 ATL3Q6DD88 541 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 ADAM5Q6NVV9 412 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 CCBE1Q6UXH8 406 aaPredicted RBP4.33□□□□□ -1.72
TUBD1-208ENST00000588009 TIPARPQ7Z3E1 657 aaKnown RBP4.33□□□□□ -1.72
TUBD1-208ENST00000588009 FAM228AQ86W67 206 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 SERPINA9Q86WD7 417 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 CCDC50Q8IVM0 306 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 Q8N377 158 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 CSNK1A1LQ8N752 337 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 OR9K2Q8NGE7 335 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 SLC38A2Q96QD8 506 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 NIPSNAP3BQ9BS92 247 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 SPATA16Q9BXB7 569 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 ZBP1Q9H171 429 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 OPN3Q9H1Y3 402 aaPredicted RBP4.33□□□□□ -1.72
TUBD1-208ENST00000588009 PPDPFQ9H3Y8 114 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 PANK3Q9H999 370 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 IMPAD1Q9NX62 359 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 SLC2A6Q9UGQ3 507 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 SUN2Q9UH99 717 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 AK6Q9Y3D8 172 aaKnown RBP4.33□□□□□ -1.72
TUBD1-208ENST00000588009 L3MBTL1Q9Y468 752 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 GON4LQ3T8J9 2241 aa4.33□□□□□ -1.72
TUBD1-208ENST00000588009 NWD1Q149M9 1564 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 BLMP54132 1417 aaPredicted RBP4.32□□□□□ -1.72
TUBD1-208ENST00000588009 FAM135BQ49AJ0 1406 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 TRAPPC8Q9Y2L5 1435 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 RPAP1Q9BWH6 1393 aaPredicted RBP4.32□□□□□ -1.72
TUBD1-208ENST00000588009 NINLQ9Y2I6 1382 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 A0A1B0GVL5 298 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 E9PBE3 544 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 KLHL41O60662 606 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 PGK1P00558 417 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 RENP00797 406 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 CT45A10P0DMU9 189 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 SERPINA2P20848 420 aa4.32□□□□□ -1.72
TUBD1-208ENST00000588009 SUCLG1P53597 346 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms