RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 ESPNLQ6ZVH7 1005 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 OLIG3Q7RTU3 272 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 MAMDC2Q7Z304 686 aaPredicted RBP12.74□□□□□ -0.37
TPM4-205ENST00000586833 RETREG3Q86VR2 466 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 FAM71CQ8NEG0 241 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 OR5M1Q8NGP8 315 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 FBXO27Q8NI29 283 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 SLC25A43Q8WUT9 341 aaPredicted RBP12.74□□□□□ -0.37
TPM4-205ENST00000586833 ITLN2Q8WWU7 325 aaPredicted RBP12.74□□□□□ -0.37
TPM4-205ENST00000586833 WNT2BQ93097 391 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 REXO5Q96IC2 774 aaKnown RBP12.74□□□□□ -0.37
TPM4-205ENST00000586833 UCN2Q96RP3 112 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 HOPXQ9BPY8 73 aaPredicted RBP12.74□□□□□ -0.37
TPM4-205ENST00000586833 PRRG4Q9BZD6 226 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 QRSL1Q9H0R6 528 aaKnown RBP12.74□□□□□ -0.37
TPM4-205ENST00000586833 RUBCNLQ9H714 662 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 CHST11Q9NPF2 352 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 ACER3Q9NUN7 267 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 KCNE5Q9UJ90 142 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 MCTS1Q9ULC4 181 aaKnown RBP12.74□□□□□ -0.37
TPM4-205ENST00000586833 ZNF443Q9Y2A4 671 aaPredicted RBP12.74□□□□□ -0.37
TPM4-205ENST00000586833 ZNF175Q9Y473 711 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 FAM215AQ9Y5M1 114 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 SPENQ96T58 3664 aaKnown RBP12.74□□□□□ -0.37
TPM4-205ENST00000586833 SHANK1Q9Y566 2161 aa12.74□□□□□ -0.37
TPM4-205ENST00000586833 CROCCQ5TZA2 2017 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 CLCA1A8K7I4 914 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 FAAHO00519 579 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 FBP2O00757 339 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 EIF1AYO14602 144 aaKnown RBP12.73□□□□□ -0.37
TPM4-205ENST00000586833 C1QCP02747 245 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 NUDT7P0C024 238 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 PABPC4LP0CB38 370 aaKnown RBP12.73□□□□□ -0.37
TPM4-205ENST00000586833 PRKCAP17252 672 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 SLC7A1P30825 629 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 PRKAR1BP31321 381 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 RYKP34925 604 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 OPRM1P35372 400 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 APOBEC1P41238 236 aaKnown RBP12.73□□□□□ -0.37
TPM4-205ENST00000586833 MAP2K6P52564 334 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 MTPNP58546 118 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 CAPRIN1Q14444 709 aaKnown RBP12.73□□□□□ -0.37
TPM4-205ENST00000586833 NDUFAF6Q330K2 333 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 SLC25A35Q3KQZ1 300 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 SLC25A53Q5H9E4 307 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 RPS26P11Q5JNZ5 115 aaPredicted RBP12.73□□□□□ -0.37
TPM4-205ENST00000586833 DCST1Q5T197 706 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 GTF2IRD2BQ6EKJ0 949 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 C3orf33Q6P1S2 294 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 GRINAQ7Z429 371 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 PATL1Q86TB9 770 aaKnown RBP12.73□□□□□ -0.37
TPM4-205ENST00000586833 GTF2IRD2Q86UP8 949 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 LILRA2Q8N149 483 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 ANKS4BQ8N8V4 417 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 OR2V1Q8NHB1 315 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 SLC26A7Q8TE54 656 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 RASSF5Q8WWW0 418 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 MAL2Q969L2 176 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 ZG16BQ96DA0 208 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 KLHL15Q96M94 604 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 LRRC37BQ96QE4 947 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 TUBA1CQ9BQE3 449 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 KAT8Q9H7Z6 458 aaKnown RBP12.73□□□□□ -0.37
TPM4-205ENST00000586833 KCNJ16Q9NPI9 418 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 RNF6Q9Y252 685 aa12.73□□□□□ -0.37
TPM4-205ENST00000586833 UBR5O95071 2799 aaPredicted RBP12.73□□□□□ -0.37
TPM4-205ENST00000586833 FASNP49327 2511 aaKnown RBP12.72□□□□□ -0.37
TPM4-205ENST00000586833 CENPVL1A0A0U1RR11 272 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 CDHR4A6H8M9 788 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 MBD3L4A6NDZ8 208 aaPredicted RBP12.72□□□□□ -0.37
TPM4-205ENST00000586833 MBD3L3A6NE82 208 aaPredicted RBP12.72□□□□□ -0.37
TPM4-205ENST00000586833 MBD3L5A6NJ08 208 aaPredicted RBP12.72□□□□□ -0.37
TPM4-205ENST00000586833 SLC22A20A6NK97 555 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 ETV2O00321 342 aaPredicted RBP12.72□□□□□ -0.37
TPM4-205ENST00000586833 DNAJA2O60884 412 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 IFNA14P01570 189 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 EIF1AXP47813 144 aaKnown RBP12.72□□□□□ -0.37
TPM4-205ENST00000586833 CLDN15P56746 228 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 SESN3P58005 492 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 NCALDP61601 193 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 MERTKQ12866 999 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 RTL6Q6ICC9 239 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 NANOGP8Q6NSW7 305 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 PPP4R4Q6NUP7 873 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 ZNF836Q6ZNA1 936 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 VRK2Q86Y07 508 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 ARMC8Q8IUR7 673 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 OR10A6Q8NH74 314 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 MBD3L2Q8NHZ7 208 aaPredicted RBP12.72□□□□□ -0.37
TPM4-205ENST00000586833 RCN3Q96D15 328 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 PSMG3-AS1Q96PY0 264 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 CCDC106Q9BWC9 280 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 NANOGQ9H9S0 305 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 DNAJB12Q9NXW2 375 aaKnown RBP12.72□□□□□ -0.37
TPM4-205ENST00000586833 SELENONQ9NZV5 590 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 RPS6KB2Q9UBS0 482 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 ZNF629Q9UEG4 869 aaPredicted RBP12.72□□□□□ -0.37
TPM4-205ENST00000586833 MYO18BQ8IUG5 2567 aa12.72□□□□□ -0.37
TPM4-205ENST00000586833 A1L4Q6 167 aa12.71□□□□□ -0.37
TPM4-205ENST00000586833 B4DXG7 233 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms