RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 NPIPA2E9PIF3 369 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 NPIPA3F8WFD2 350 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 SYT5O00445 386 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 GSTA4O15217 222 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 C8BP07358 591 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 STSP08842 583 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 PRKCAP17252 672 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 BMP7P18075 431 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 HTR1EP28566 365 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 KDELR2P33947 212 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 RYKP34925 604 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 DLX5P56178 289 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 POLEQ07864 2286 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 DMTNQ08495 405 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 EPS8Q12929 822 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 BCL2A1Q16548 175 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 WLSQ5T9L3 541 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 PM20D2Q8IYS1 436 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 TAMM41Q96BW9 452 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 CDRT15Q96T59 188 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 TIMP4Q99727 224 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 KLHDC3Q9BQ90 382 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 ACER3Q9NUN7 267 aa17.34■□□□□ 0.37
DDX39A-204ENST00000586558 NCKAP5O14513 1909 aa17.33■□□□□ 0.37
DDX39A-204ENST00000586558 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 CXCR6O00574 342 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 NTN1O95631 604 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 CPN1P15169 458 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 TCEA1P23193 301 aaKnown RBP17.33■□□□□ 0.36
DDX39A-204ENST00000586558 PSMA4P25789 261 aaKnown RBP17.33■□□□□ 0.36
DDX39A-204ENST00000586558 UQCRFS1P47985 274 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 KCNJ5P48544 419 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 CBX1P83916 185 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 FOXF1Q12946 379 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 TOMM34Q15785 309 aaPredicted RBP17.33■□□□□ 0.36
DDX39A-204ENST00000586558 RINLQ6ZS11 566 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 ZNF563Q8TA94 476 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 RNF145Q96MT1 663 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 PRDM14Q9GZV8 571 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 TAS2R1Q9NYW7 299 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 CD300AQ9UGN4 299 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 BAG5Q9UL15 447 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 OSGIN2Q9Y236 505 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 AP4B1Q9Y6B7 739 aa17.33■□□□□ 0.36
DDX39A-204ENST00000586558 FIGNL2A6NMB9 653 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 AP3D1O14617 1153 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 TPST1O60507 370 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 ADAM11O75078 769 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 GMNNO75496 209 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 OPN1SWP03999 348 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 TPOP07202 933 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 HOXD4P09016 255 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-204ENST00000586558 PEPDP12955 493 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 GP1BBP13224 206 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 POU3F2P20265 443 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-204ENST00000586558 CD247P20963 164 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 ME2P23368 584 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 ACAA2P42765 397 aaKnown RBP17.32■□□□□ 0.36
DDX39A-204ENST00000586558 HTR3AP46098 478 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 CRYBA2P53672 197 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 SESN3P58005 492 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 COPZ1P61923 177 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 BNIP1Q12981 228 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 SF3B4Q15427 424 aaKnown RBP eCLIP17.32■□□□□ 0.363e-6■■■■□ 23.8
DDX39A-204ENST00000586558 FXNQ16595 210 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 GXYLT1Q4G148 440 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 C6orf89Q6UWU4 347 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 CD163Q86VB7 1156 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 EID3Q8N140 333 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 SMYD1Q8NB12 490 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 POC1BQ8TC44 478 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 FIG4Q92562 907 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 RSPO3Q9BXY4 272 aaPredicted RBP17.32■□□□□ 0.36
DDX39A-204ENST00000586558 GMPR2Q9P2T1 348 aaKnown RBP17.32■□□□□ 0.36
DDX39A-204ENST00000586558 PRPF19Q9UMS4 504 aaKnown RBP17.32■□□□□ 0.36
DDX39A-204ENST00000586558 ZNF337Q9Y3M9 751 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 ZNF407Q9C0G0 2248 aa17.32■□□□□ 0.36
DDX39A-204ENST00000586558 UBR5O95071 2799 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-204ENST00000586558 WDR1O75083 606 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 ATP5HO75947 161 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 EPPINO95925 133 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 LGI1O95970 557 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 GKN3PP0CG01 181 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 GABRA1P14867 456 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 ZNF708P17019 499 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 GGT1P19440 569 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 PTGER4P35408 488 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 SLC1A3P43003 542 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 CA7P43166 264 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 IDH2P48735 452 aaKnown RBP17.31■□□□□ 0.36
DDX39A-204ENST00000586558 LHX2P50458 406 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 RGS8P57771 180 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-204ENST00000586558 DUSP7Q16829 419 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 GLIPR1L2Q4G1C9 344 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 DNAL1Q4LDG9 190 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 LRRC23Q53EV4 343 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-204ENST00000586558 CYBRD1Q53TN4 286 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 DCST1Q5T197 706 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 GRINAQ7Z429 371 aa17.31■□□□□ 0.36
DDX39A-204ENST00000586558 RNF148Q8N7C7 305 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms