RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PHC2Q8IXK0 858 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 KIRREL3Q8IZU9 778 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 ARFGAP2Q8N6H7 521 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 COX18Q8N8Q8 333 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 ANKRD42Q8N9B4 389 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 OR7A2PQ8NGA2 310 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 OR6Y1Q8NGX8 325 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 JADE3Q92613 823 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 FBXW5Q969U6 566 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 GTPBP3Q969Y2 492 aaKnown RBP10.31□□□□□ -0.76
LIG3-207ENST00000586119 ZBTB9Q96C00 473 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 FAM120BQ96EK7 910 aaKnown RBP10.31□□□□□ -0.76
LIG3-207ENST00000586119 FCRL1Q96LA6 429 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 TACO1Q9BSH4 297 aaKnown RBP10.31□□□□□ -0.76
LIG3-207ENST00000586119 GATA5Q9BWX5 397 aaPredicted RBP10.31□□□□□ -0.76
LIG3-207ENST00000586119 OR10A4Q9H209 315 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 CXorf36Q9H7Y0 433 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 UBQLN4Q9NRR5 601 aa10.31□□□□□ -0.76
LIG3-207ENST00000586119 TMEM114B3SHH9 223 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 TMEM233B4DJY2 109 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 SLC28A1O00337 649 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 TBX19O60806 448 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 LYZL6O75951 148 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 SERPINE1P05121 402 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 HMGN2P05204 90 aaKnown RBP10.3□□□□□ -0.76
LIG3-207ENST00000586119 THBS1P07996 1170 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 IFI6P09912 130 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 HPGDP15428 266 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 IL32P24001 234 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 ADH6P28332 368 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 WDR4P57081 412 aaKnown RBP10.3□□□□□ -0.76
LIG3-207ENST00000586119 C21orf58P58505 322 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 RPL38P63173 70 aaKnown RBP10.3□□□□□ -0.76
LIG3-207ENST00000586119 POU6F2P78424 691 aaPredicted RBP10.3□□□□□ -0.76
LIG3-207ENST00000586119 GALNTL6Q49A17 601 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 VPS26BQ4G0F5 336 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 KLHL26Q53HC5 615 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 PDSS1Q5T2R2 415 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 GTF2IRD2BQ6EKJ0 949 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 DNM1P46Q6ZS02 220 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 GTF2IRD2Q86UP8 949 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 RFWD2Q8NHY2 731 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 PIWIL2Q8TC59 973 aaKnown RBP10.3□□□□□ -0.76
LIG3-207ENST00000586119 GPR119Q8TDV5 335 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 HTRA1Q92743 480 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 ZBED6CLQ96FA7 236 aaPredicted RBP10.3□□□□□ -0.76
LIG3-207ENST00000586119 TRMT61AQ96FX7 289 aaKnown RBP10.3□□□□□ -0.76
LIG3-207ENST00000586119 CHMP6Q96FZ7 201 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 MS4A4EQ96PG1 132 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 ZNF300Q96RE9 604 aaPredicted RBP10.3□□□□□ -0.76
LIG3-207ENST00000586119 BTBD2Q9BX70 525 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 HDHD5Q9BXW7 423 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 TRIM2Q9C040 744 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 EML4Q9HC35 981 aaKnown RBP10.3□□□□□ -0.76
LIG3-207ENST00000586119 ZCCHC3Q9NUD5 404 aaKnown RBP10.3□□□□□ -0.76
LIG3-207ENST00000586119 NPAP1Q9NZP6 1156 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 KLHL13Q9P2N7 655 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 ICAM5Q9UMF0 924 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 PLCE1Q9P212 2302 aa10.3□□□□□ -0.76
LIG3-207ENST00000586119 A0A1W2PP18 115 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 A0A1W2PQD3 144 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 RNF212BA8MTL3 300 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 SHISA9B4DS77 424 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 AZIN1O14977 448 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 LSM1O15116 133 aaKnown RBP10.29□□□□□ -0.76
LIG3-207ENST00000586119 RGS14O43566 566 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 SSX4O60224 188 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 PRKD3O94806 890 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 NUDT14O95848 222 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 YES1P07947 543 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 LAMP1P11279 417 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 NEFHP12036 1026 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 BCKDHAP12694 445 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 PRKCAP17252 672 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 ME2P23368 584 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 ITGADQ13349 1161 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 STK11Q15831 433 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 CDC73Q6P1J9 531 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 BHLHA15Q7RTS1 189 aaPredicted RBP10.29□□□□□ -0.76
LIG3-207ENST00000586119 ZFP28Q8NHY6 868 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 HSD17B8Q92506 261 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 ZNF75CPQ92670 426 aaPredicted RBP10.29□□□□□ -0.76
LIG3-207ENST00000586119 KISS1RQ969F8 398 aaPredicted RBP10.29□□□□□ -0.76
LIG3-207ENST00000586119 DNAJA3Q96EY1 480 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 REXO5Q96IC2 774 aaKnown RBP10.29□□□□□ -0.76
LIG3-207ENST00000586119 CCT7Q99832 543 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 PAIP2Q9BPZ3 127 aaKnown RBP10.29□□□□□ -0.76
LIG3-207ENST00000586119 PSD2Q9BQI7 771 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 TRAF4Q9BUZ4 470 aaPredicted RBP10.29□□□□□ -0.76
LIG3-207ENST00000586119 MECRQ9BV79 373 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 QRSL1Q9H0R6 528 aaKnown RBP10.29□□□□□ -0.76
LIG3-207ENST00000586119 PIGUQ9H490 435 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 ESRP2Q9H6T0 727 aaKnown RBP10.29□□□□□ -0.76
LIG3-207ENST00000586119 FANCFQ9NPI8 374 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 ACSS1Q9NUB1 689 aaPredicted RBP10.29□□□□□ -0.76
LIG3-207ENST00000586119 CISD1Q9NZ45 108 aaKnown RBP10.29□□□□□ -0.76
LIG3-207ENST00000586119 B3GALT5Q9Y2C3 310 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 SNX8Q9Y5X2 465 aa10.29□□□□□ -0.76
LIG3-207ENST00000586119 IGHV4-30-2A0A087WSY4 118 aa10.28□□□□□ -0.76
LIG3-207ENST00000586119 CENPVL1A0A0U1RR11 272 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms