RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 OCIAD1Q9NX40 245 aa13.87□□□□□ -0.19
CDK5RAP3-236ENST00000584991 SIDT1Q9NXL6 827 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-236ENST00000584991 RARRES3Q9UL19 164 aa13.87□□□□□ -0.19
CDK5RAP3-236ENST00000584991 SEC16AO15027 2179 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 WDR87Q6ZQQ6 2873 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 TRDV1A0A1B0GX56 115 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 CDC123O75794 336 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 CDRT1O95170 752 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 EPPINO95925 133 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 HMGN2P05204 90 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 CHRM4P08173 479 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 IL7P13232 177 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ETV5P41161 510 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ETV1P50549 477 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ZFP36L1Q07352 338 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 TRA2AQ13595 282 aaKnown RBP eCLIP13.86□□□□□ -0.191e-7■□□□□ 8.1
CDK5RAP3-236ENST00000584991 DOC2BQ14184 412 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 LTB4RQ15722 352 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ZNF79Q15937 498 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 DECR1Q16698 335 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 C1orf189Q5VU69 101 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 TMEM107Q6UX40 140 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 RRM2BQ7LG56 351 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 OR5D16Q8NGK9 328 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 OR6F1Q8NGZ6 308 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ADAMTS18Q8TE60 1221 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 KAT2AQ92830 837 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 UFD1Q92890 307 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 OTUB1Q96FW1 271 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ARHGAP9Q9BRR9 750 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 SLC7A5P2Q9GIP4 190 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 SLC22A4Q9H015 551 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 NEK6Q9HC98 313 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 NTMQ9P121 344 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ZNF221Q9UK13 617 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 MRPS33Q9Y291 106 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 CAB39Q9Y376 341 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 SF3B6Q9Y3B4 125 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 FER1L5A0AVI2 2057 aa13.86□□□□□ -0.19
CDK5RAP3-236ENST00000584991 COL27A1Q8IZC6 1860 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 A0A087WUU8 490 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 FAM172BPA6NC97 362 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ALPPP05187 535 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 DDOSTP39656 456 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 MC3RP41968 323 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 PDX1P52945 283 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 TAS2R41P59536 307 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 GPAT3Q53EU6 434 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ZNF311Q5JNZ3 666 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 YOD1Q5VVQ6 348 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ZNF517Q6ZMY9 492 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 QSOX2Q6ZRP7 698 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 NRARPQ7Z6K4 114 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 POGLUT1Q8NBL1 392 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ANKK1Q8NFD2 765 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 PIGXQ8TBF5 258 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 RNFT2Q96EX2 444 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 WFDC6Q9BQY6 131 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ANKRA2Q9H9E1 313 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ZNF304Q9HCX3 659 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 KRCC1Q9NPI7 259 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 IL20Q9NYY1 176 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 PLEKHB1Q9UF11 243 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 POU2F3Q9UKI9 436 aa13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 SPIN1Q9Y657 262 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-236ENST00000584991 A0A1B0GX78 115 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 OR2W5A6NFC9 320 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 EFCAB7A8K855 629 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 GDF9O60383 454 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 LRP3O75074 770 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 TIAF1O95411 115 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 GSTT2P0CG29 244 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 GSTT2BP0CG30 244 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 FPR3P25089 353 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 SDC2P34741 201 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 PRKAG1P54619 331 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 PPP3R1P63098 170 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 BTG2P78543 158 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 FUT5Q11128 374 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 DSG2Q14126 1118 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 RSBN1Q5VWQ0 802 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ZNF595Q8IYB9 648 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ACOT11Q8WXI4 607 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 DIO2Q92813 273 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ELP4Q96EB1 424 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ACTRT3Q9BYD9 372 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 APMAPQ9HDC9 416 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 PRTFDC1Q9NRG1 225 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 C14orf119Q9NWQ9 140 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 SRPK3Q9UPE1 567 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 EXOGQ9Y2C4 368 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 OTOGLQ3ZCN5 2332 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 BLACEA4D250 179 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 FABP12A6NFH5 140 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 HMX3A6NHT5 357 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 CLDN4O14493 209 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 CTNSO60931 367 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 SCRG1O75711 98 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 HMGN1P05114 100 aa13.84□□□□□ -0.19
CDK5RAP3-236ENST00000584991 FBLP22087 321 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms