RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 SLC35A3Q9Y2D2 325 aa11.79□□□□□ -0.52
ERBB2-220ENST00000584684 EMC9Q9Y3B6 208 aa11.79□□□□□ -0.52
ERBB2-220ENST00000584684 WDR45Q9Y484 360 aa11.79□□□□□ -0.52
ERBB2-220ENST00000584684 TNFSF11O14788 317 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 CXCL13O43927 109 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 SLC22A3O75751 556 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 TGDSO95455 350 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 SYNGR4O95473 234 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 CSTAP01040 98 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 PABPC4LP0CB38 370 aaKnown RBP11.78□□□□□ -0.52
ERBB2-220ENST00000584684 ZCCHC18P0CG32 403 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 IL11P20809 199 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 DNAJA1P31689 397 aaKnown RBP11.78□□□□□ -0.52
ERBB2-220ENST00000584684 CCKARP32238 428 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 CPOXP36551 454 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 CD79BP40259 229 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 NME5P56597 212 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 SIRPAP78324 504 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 HPCAP84074 193 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 QPRTQ15274 297 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 TOMM34Q15785 309 aaPredicted RBP11.78□□□□□ -0.52
ERBB2-220ENST00000584684 ZNF239Q16600 458 aaKnown RBP11.78□□□□□ -0.52
ERBB2-220ENST00000584684 NXNQ6DKJ4 435 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 ZNF474Q6S9Z5 364 aaPredicted RBP11.78□□□□□ -0.52
ERBB2-220ENST00000584684 RNF130Q86XS8 419 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 ZNF619Q8N2I2 560 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 TMCO5AQ8N6Q1 288 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 LINC01560Q8TB33 94 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 XAGE5Q8WWM1 108 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 PMM1Q92871 262 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 RAB8BQ92930 207 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 TRNT1Q96Q11 434 aaKnown RBP11.78□□□□□ -0.52
ERBB2-220ENST00000584684 OR52B2Q96RD2 323 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 SLC39A3Q9BRY0 314 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 INPP5KQ9BT40 448 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 OPN3Q9H1Y3 402 aaPredicted RBP11.78□□□□□ -0.52
ERBB2-220ENST00000584684 TMEM185BQ9H7F4 350 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 VIPAS39Q9H9C1 493 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 TIGARQ9NQ88 270 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 EXOSC3Q9NQT5 275 aaKnown RBP11.78□□□□□ -0.52
ERBB2-220ENST00000584684 USH1CQ9Y6N9 552 aa11.78□□□□□ -0.52
ERBB2-220ENST00000584684 PRAMEF27A3QJZ7 478 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 C9JVG2 144 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 RFXANKO14593 260 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 UBDO15205 165 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 EFNA2O43921 213 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 PLGP00747 810 aaPredicted RBP11.77□□□□□ -0.53
ERBB2-220ENST00000584684 SHC1P29353 583 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 UGT2B10P36537 528 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 PGM1P36871 562 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 CDKN2CP42773 168 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 RNF144AP50876 292 aaPredicted RBP11.77□□□□□ -0.53
ERBB2-220ENST00000584684 CCR4P51679 360 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 RNPS1Q15287 305 aaKnown RBP11.77□□□□□ -0.53
ERBB2-220ENST00000584684 MAPK14Q16539 360 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 TTMPQ5BVD1 217 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 C3orf33Q6P1S2 294 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 EPGNQ6UW88 154 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 CDC20BQ86Y33 519 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 CMIPQ8IY22 773 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 ZFP90Q8TF47 636 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 OSTF1Q92882 214 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 ZNF524Q96C55 264 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 PRRG4Q9BZD6 226 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 COQ10BQ9H8M1 238 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 PLSCR4Q9NRQ2 329 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 NDRG3Q9UGV2 375 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 EDARQ9UNE0 448 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 PROCRQ9UNN8 238 aa11.77□□□□□ -0.53
ERBB2-220ENST00000584684 AGAP5A6NIR3 686 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 HMGB1P1B2RPK0 211 aaPredicted RBP11.76□□□□□ -0.53
ERBB2-220ENST00000584684 DIAPH2O60879 1101 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 H6PDO95479 791 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 KRT75O95678 551 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 HRGP04196 525 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 UBTFL6P0CB48 400 aaPredicted RBP11.76□□□□□ -0.53
ERBB2-220ENST00000584684 POU2F1P14859 743 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 CD1EP15812 388 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 PGCP20142 388 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 RPS4Y1P22090 263 aaKnown RBP11.76□□□□□ -0.53
ERBB2-220ENST00000584684 AGTR1P30556 359 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 SFTPDP35247 375 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 MVDP53602 400 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 CASP9P55211 416 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 CTBP2P56545 445 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 CARD18P57730 90 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 PLAURQ03405 335 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 GTF2IRD2BQ6EKJ0 949 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 LRRC74BQ6ZQY2 392 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 OLIG3Q7RTU3 272 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 GTF2IRD2Q86UP8 949 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 MIER2Q8N344 545 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 LRRC8CQ8TDW0 803 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 SLC25A43Q8WUT9 341 aaPredicted RBP11.76□□□□□ -0.53
ERBB2-220ENST00000584684 STON2Q8WXE9 905 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 TMEM234Q8WY98 164 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 MARK4Q96L34 752 aa11.76□□□□□ -0.53
ERBB2-220ENST00000584684 TACO1Q9BSH4 297 aaKnown RBP11.76□□□□□ -0.53
ERBB2-220ENST00000584684 THUMPD3Q9BV44 507 aaKnown RBP11.76□□□□□ -0.53
ERBB2-220ENST00000584684 SRXN1Q9BYN0 137 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms