RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZNF844Q08AG5 666 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 GUSBP1Q15486 140 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 CD226Q15762 336 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 CHI3L2Q15782 390 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 GTF2IRD2BQ6EKJ0 949 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 CROCCP2Q86T23 111 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 GTF2IRD2Q86UP8 949 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 OR6K3Q8NGY3 331 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 OR10D3Q8NH80 312 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 OR2V1Q8NHB1 315 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 ADGRG7Q96K78 797 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 PKNOX2Q96KN3 472 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 GPATCH2Q9NW75 528 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.95□□□□□ -0.82
CCDC47-206ENST00000584112 PCDHGB4Q9UN71 923 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 RAP2CQ9Y3L5 183 aa9.95□□□□□ -0.82
CCDC47-206ENST00000584112 V9GYY5 206 aaPredicted RBP9.95□□□□□ -0.82
CCDC47-206ENST00000584112 WDR91A4D1P6 747 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 GJE1A6NN92 205 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 GTPBP1O00178 669 aaKnown RBP9.94□□□□□ -0.82
CCDC47-206ENST00000584112 RNASET2O00584 256 aaKnown RBP9.94□□□□□ -0.82
CCDC47-206ENST00000584112 TNFSF11O14788 317 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 ADAMDEC1O15204 470 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 CXCL13O43927 109 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 SS18L1O75177 396 aaPredicted RBP9.94□□□□□ -0.82
CCDC47-206ENST00000584112 AK1P00568 194 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 LINGO3P0C6S8 592 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 PABPC4LP0CB38 370 aaKnown RBP9.94□□□□□ -0.82
CCDC47-206ENST00000584112 CRYGSP22914 178 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 THBS2P35442 1172 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 ATP12AP54707 1039 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 ABCE1P61221 599 aaKnown RBP9.94□□□□□ -0.82
CCDC47-206ENST00000584112 HBA1P69905 142 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 ZNF117Q03924 483 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 CTU2Q2VPK5 515 aaKnown RBP9.94□□□□□ -0.82
CCDC47-206ENST00000584112 PGS1Q32NB8 556 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 KLHL26Q53HC5 615 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 HBMQ6B0K9 141 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 LILRA2Q8N149 483 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 ZNF614Q8N883 585 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 ZNF781Q8N8C0 355 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 ZNF610Q8N9Z0 462 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 OR5AK3PQ8NH89 298 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 C1orf159Q96HA4 380 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 REXO5Q96IC2 774 aaKnown RBP9.94□□□□□ -0.82
CCDC47-206ENST00000584112 KLHL15Q96M94 604 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 WFIKKN1Q96NZ8 548 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 OR7D2Q96RA2 312 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 REG4Q9BYZ8 158 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 GSX2Q9BZM3 304 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 TIGARQ9NQ88 270 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 PLSCR4Q9NRQ2 329 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 KLHL28Q9NXS3 571 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 ACTL7BQ9Y614 415 aa9.94□□□□□ -0.82
CCDC47-206ENST00000584112 GPC6Q9Y625 555 aaPredicted RBP9.94□□□□□ -0.82
CCDC47-206ENST00000584112 CADP27708 2225 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 NPIPA5A0A0B4J1W7 369 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 A0A0J9YW62 118 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 NPIPA7E9PJI5 369 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 ITM2AO43736 263 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 EIF4E2O60573 245 aaKnown RBP9.93□□□□□ -0.82
CCDC47-206ENST00000584112 AGR2O95994 175 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 TUBBP07437 444 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 DHRS4L1P0CG22 281 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 NPIPA8P0DM63 369 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 PPP3CBP16298 524 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 IL11P20809 199 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 MATN1P21941 496 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 CCKARP32238 428 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 SFTPDP35247 375 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 SLC6A8P48029 635 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 SLC1A6P48664 564 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 RPL14P50914 215 aaKnown RBP9.93□□□□□ -0.82
CCDC47-206ENST00000584112 CARD18P57730 90 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 FOXF1Q12946 379 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 DPY19L1Q2PZI1 675 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 OR4F3Q6IEY1 312 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 C6orf120Q7Z4R8 191 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 STK32CQ86UX6 486 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 LRRC34Q8IZ02 419 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 VPS37AQ8NEZ2 397 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 TOR1AIP2Q8NFQ8 470 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 OR8J2Q8NGG1 315 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 POC1BQ8TC44 478 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 CPNE4Q96A23 557 aaPredicted RBP9.93□□□□□ -0.82
CCDC47-206ENST00000584112 ARL8AQ96BM9 186 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 SLC35G5Q96KT7 338 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 SDF2Q99470 211 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 NPAS1Q99742 590 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 PARD6BQ9BYG5 372 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 DPY30Q9C005 99 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 KLHL4Q9C0H6 718 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 NMUR2Q9GZQ4 415 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 CENPHQ9H3R5 247 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 TMEM185BQ9H7F4 350 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 AKTIPQ9H8T0 292 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 EXD2Q9NVH0 621 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 ICAM5Q9UMF0 924 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 CARD8Q9Y2G2 431 aa9.93□□□□□ -0.82
CCDC47-206ENST00000584112 DTNAQ9Y4J8 743 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms