RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 CDC42EP2O14613 210 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 CSO75390 466 aaKnown RBP20.87■□□□□ 0.93
CCDC47-204ENST00000582252 CLPSP04118 112 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 CKMT1AP12532 417 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 PPICP45877 212 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 RNF144AP50876 292 aaPredicted RBP20.87■□□□□ 0.93
CCDC47-204ENST00000582252 DUSP3P51452 185 aaPredicted RBP20.87■□□□□ 0.93
CCDC47-204ENST00000582252 DAB2P98082 770 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 PLAURQ03405 335 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 ZNF846Q147U1 533 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 ALG10BQ5I7T1 473 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 ARHGAP40Q5TG30 622 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 GRHL3Q8TE85 626 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 PTPMT1Q8WUK0 201 aaPredicted RBP20.87■□□□□ 0.93
CCDC47-204ENST00000582252 DPYSL5Q9BPU6 564 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 HHATLQ9HCP6 504 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 OSGIN1Q9UJX0 560 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 IGKV3D-11A0A0A0MRZ8 115 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 HCN1O60741 890 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 CSTAP01040 98 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 ACAA2P42765 397 aaKnown RBP20.87■□□□□ 0.93
CCDC47-204ENST00000582252 BMXP51813 675 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 CDH11P55287 796 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 DCAF7P61962 342 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 SQSTM1Q13501 440 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 ULK3Q6PHR2 472 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 C19orf48Q6RUI8 117 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 DBX2Q6ZNG2 339 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 GID4Q8IVV7 300 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 ZNF501Q96CX3 271 aaPredicted RBP20.87■□□□□ 0.93
CCDC47-204ENST00000582252 IRF2BPLQ9H1B7 796 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 FN3KQ9H479 309 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 MKKSQ9NPJ1 570 aaPredicted RBP20.87■□□□□ 0.93
CCDC47-204ENST00000582252 FGF21Q9NSA1 209 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 GPR52Q9Y2T5 361 aa20.87■□□□□ 0.93
CCDC47-204ENST00000582252 ADAMTS20P59510 1910 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 EP300Q09472 2414 aaPredicted RBP20.86■□□□□ 0.93
CCDC47-204ENST00000582252 FLRT2O43155 660 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 ADRA2AP08913 450 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 SAGP10523 405 aaPredicted RBP20.86■□□□□ 0.93
CCDC47-204ENST00000582252 LCN1P31025 176 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 GPR143P51810 404 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 SLC37A1P57057 533 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 MLLT11Q13015 90 aaPredicted RBP20.86■□□□□ 0.93
CCDC47-204ENST00000582252 NNATQ16517 81 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 NXNL2Q5VZ03 156 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 GDPGP1Q6ZNW5 385 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 AMER2Q8N7J2 671 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 OR14A16Q8NHC5 309 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 DAZLQ92904 295 aaKnown RBP20.86■□□□□ 0.93
CCDC47-204ENST00000582252 OPALINQ96PE5 141 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 TAPBPLQ9BX59 468 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 UBQLN3Q9H347 655 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 FLRT3Q9NZU0 649 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 BAIAP2Q9UQB8 552 aa20.86■□□□□ 0.93
CCDC47-204ENST00000582252 LOC100506127A0A0U1RQW1 187 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 FRG2CA6NGY1 282 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 CLDN25C9JDP6 229 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 HYAL3O43820 417 aaPredicted RBP20.85■□□□□ 0.93
CCDC47-204ENST00000582252 CH25HO95992 272 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 HPGDP15428 266 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 MAKP20794 623 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 COPZ1P61923 177 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 ACY1Q03154 408 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 PERM1Q5SV97 790 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 AADACL4Q5VUY2 407 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 SMARCD3Q6STE5 483 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 HSDL2Q6YN16 418 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.85■□□□□ 0.93
CCDC47-204ENST00000582252 DNAJA4Q8WW22 397 aaPredicted RBP20.85■□□□□ 0.93
CCDC47-204ENST00000582252 CCNL2Q96S94 520 aaPredicted RBP20.85■□□□□ 0.93
CCDC47-204ENST00000582252 NUDT22Q9BRQ3 303 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 ZNF426Q9BUY5 554 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 SLC7A5P2Q9GIP4 190 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 ZBTB20Q9HC78 741 aaPredicted RBP20.85■□□□□ 0.93
CCDC47-204ENST00000582252 UBQLN4Q9NRR5 601 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 CLEC2DQ9UHP7 191 aa20.85■□□□□ 0.93
CCDC47-204ENST00000582252 TCRBV16S1A1N1A0A5B0 115 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 KPNA4O00629 521 aaPredicted RBP20.84■□□□□ 0.93
CCDC47-204ENST00000582252 IL33O95760 270 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 ADH7P40394 386 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 C16orf87Q6PH81 154 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 SH3YL1Q96HL8 342 aaPredicted RBP20.84■□□□□ 0.93
CCDC47-204ENST00000582252 LCORQ96JN0 433 aaPredicted RBP20.84■□□□□ 0.93
CCDC47-204ENST00000582252 CHCHD6Q9BRQ6 235 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 OR8D2Q9GZM6 311 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 OR51E2Q9H255 320 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 ISYNA1Q9NPH2 558 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 FBXO8Q9NRD0 319 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 C20orf141Q9NUB4 165 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 CCDC59Q9P031 241 aaKnown RBP20.84■□□□□ 0.93
CCDC47-204ENST00000582252 SEC14L4Q9UDX3 406 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 A3GALT2U3KPV4 340 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 TMEM129A0AVI4 362 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 ANKRD34CP0C6C1 535 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 ENDOUP21128 410 aaKnown RBP20.84■□□□□ 0.93
CCDC47-204ENST00000582252 HTR1FP30939 366 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 MLLT10P55197 1068 aa20.84■□□□□ 0.93
CCDC47-204ENST00000582252 SF3A2Q15428 464 aaKnown RBP20.84■□□□□ 0.93
CCDC47-204ENST00000582252 CADM2Q8N3J6 435 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms