RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ADH7P40394 386 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 SLC34A1Q06495 639 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 FGFBP1Q14512 234 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 SLC10A1Q14973 349 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 TOMM20Q15388 145 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 MAPK14Q16539 360 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 CMPK2Q5EBM0 449 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 ZNF311Q5JNZ3 666 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 RPS26P11Q5JNZ5 115 aaPredicted RBP14.11□□□□□ -0.15
SS18-216ENST00000580751 OR5M10Q6IEU7 315 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 ZNF605Q86T29 641 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 ATCAYQ86WG3 371 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 GHDCQ8N2G8 530 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 PQLC1Q8N2U9 271 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 OR2M3Q8NG83 312 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 OR52P1PQ8NH57 321 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 MIB2Q96AX9 1013 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 HSH2DQ96JZ2 352 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 ZNF347Q96SE7 839 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 QRSL1Q9H0R6 528 aaKnown RBP14.11□□□□□ -0.15
SS18-216ENST00000580751 ACKR4Q9NPB9 350 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.11□□□□□ -0.15
SS18-216ENST00000580751 STOML1Q9UBI4 398 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 DKKL1Q9UK85 242 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 FBXL2Q9UKC9 423 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 SLC13A4Q9UKG4 626 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 SLC9A8Q9Y2E8 581 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 C17orf51A8MQB3 221 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 TMEM229AB2RXF0 380 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 ZNF264O43296 627 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 CDC40O60508 579 aaKnown RBP eCLIP14.1□□□□□ -0.15
SS18-216ENST00000580751 EIF4E2O60573 245 aaKnown RBP14.1□□□□□ -0.15
SS18-216ENST00000580751 DEAF1O75398 565 aaPredicted RBP14.1□□□□□ -0.15
SS18-216ENST00000580751 TRAPPC6AO75865 159 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 LGI1O95970 557 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 CSTAP01040 98 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 IGHG3P01860 377 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 FESP07332 822 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 NID1P14543 1247 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 GCKP35557 465 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 SUMO3P55854 103 aaPredicted RBP14.1□□□□□ -0.15
SS18-216ENST00000580751 DSCR4P56555 118 aaPredicted RBP14.1□□□□□ -0.15
SS18-216ENST00000580751 KCNJ10P78508 379 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 ZNF117Q03924 483 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 ENPP6Q6UWR7 440 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 GRAMD2AQ8IUY3 354 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 GALNT11Q8NCW6 608 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 ST6GALNAC3Q8NDV1 305 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 TOR1AIP2Q8NFQ8 470 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 B4GALNT2Q8NHY0 566 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 ZG16BQ96DA0 208 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 C7orf34Q96L11 122 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 SEPHS2Q99611 448 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 OR2B2Q9GZK3 357 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 POLR2J2Q9GZM3 115 aaKnown RBP14.1□□□□□ -0.15
SS18-216ENST00000580751 POLR2J3Q9H1A7 115 aaKnown RBP14.1□□□□□ -0.15
SS18-216ENST00000580751 DEFB127Q9H1M4 99 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 DSN1Q9H410 356 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 PLSCR2Q9NRY7 297 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 MED11Q9P086 117 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 HRH3Q9Y5N1 445 aa14.1□□□□□ -0.15
SS18-216ENST00000580751 FAM47E-STBD1D6RA91 191 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 HCN1O60741 890 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 LDLRP01130 860 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 IFNW1P05000 195 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 FABP3P05413 133 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 CELA3AP09093 270 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 DPP4P27487 766 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 RNF144AP50876 292 aaPredicted RBP14.09□□□□□ -0.15
SS18-216ENST00000580751 FOXK1P85037 733 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 RBPJQ06330 500 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 ATP6AP1Q15904 470 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 SNCBQ16143 134 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 DUSP7Q16829 419 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 ARHGAP11AQ6P4F7 1023 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 GFRALQ6UXV0 394 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 TRILQ7L0X0 811 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 HMGN2P46Q86SG4 172 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 TMCO5AQ8N6Q1 288 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 FAM71CQ8NEG0 241 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 C1GALT1C1Q96EU7 318 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 CENPNQ96H22 339 aaPredicted RBP14.09□□□□□ -0.15
SS18-216ENST00000580751 SH3YL1Q96HL8 342 aaPredicted RBP14.09□□□□□ -0.15
SS18-216ENST00000580751 TPD52L3Q96J77 140 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 BDH2Q9BUT1 245 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 LDAHQ9H6V9 325 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 EXO5Q9H790 373 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 C8orf4Q9NR00 106 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 DNAJB9Q9UBS3 223 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 ZNF443Q9Y2A4 671 aaPredicted RBP14.09□□□□□ -0.15
SS18-216ENST00000580751 CARD8Q9Y2G2 431 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 MRPS18CQ9Y3D5 142 aaKnown RBP14.09□□□□□ -0.15
SS18-216ENST00000580751 ZNF407Q9C0G0 2248 aa14.09□□□□□ -0.15
SS18-216ENST00000580751 A0A087WZY1 265 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 TRGV5A0A0B4J1U4 118 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 B4DXG7 233 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 SUSD5O60279 629 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 PRSS23O95084 383 aa14.08□□□□□ -0.16
SS18-216ENST00000580751 UBTFL6P0CB48 400 aaPredicted RBP14.08□□□□□ -0.16
SS18-216ENST00000580751 P2RX1P51575 399 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms