RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 OR4C3Q8NH37 302 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 ACTRT2Q8TDY3 377 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 UBASH3BQ8TF42 649 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 NEU4Q8WWR8 484 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 CFAP36Q96G28 342 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 UBXN10Q96LJ8 280 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 DOK1Q99704 481 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 DESI2Q9BSY9 194 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 NAT9Q9BTE0 207 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 RHOJQ9H4E5 214 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 ALG9Q9H6U8 611 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 TIGARQ9NQ88 270 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 CA10Q9NS85 328 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 TAS2R9Q9NYW1 312 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 TREM2Q9NZC2 230 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 ZDHHC2Q9UIJ5 367 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 FBXO9Q9UK97 447 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 UTS2RQ9UKP6 389 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 MTO1Q9Y2Z2 717 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 PCDHB14Q9Y5E9 798 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 ZNF780BQ9Y6R6 833 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 TRAV20A0A0B4J274 112 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 IGHV1-18A0A0C4DH31 117 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 A0A1W2PNR3 127 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 TMEM129A0AVI4 362 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 SUPT3HB4E1H0 165 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 ALG1L2C9J202 215 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 GOLGA6L22H0YM25 854 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 PAX4O43316 350 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 UGDHO60701 494 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 KERAO60938 352 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 SUPT3HO75486 399 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 PIAS1O75925 651 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 PRSS23O95084 383 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 PSMG1O95456 288 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 OXSR1O95747 527 aaPredicted RBP6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 LTA4HP09960 611 aaKnown RBP6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 H2AFB1P0C5Y9 115 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 H2AFB2P0C5Z0 115 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 DDX5P17844 614 aaKnown RBP6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 ELK4P28324 431 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 ELK3P41970 407 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 PRIM2P49643 509 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 ZNF41P51814 821 aaPredicted RBP6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 GYS2P54840 703 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 RAC3P60763 192 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 TRADDQ15628 312 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 PRSS53Q2L4Q9 553 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 TCHHL1Q5QJ38 904 aaPredicted RBP6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 GALNT5Q7Z7M9 940 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 ZAR1Q86SH2 424 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 UBE2J2Q8N2K1 259 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 OR51F2Q8NH61 342 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 ZFP90Q8TF47 636 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 MAIP1Q8WWC4 291 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 SH3YL1Q96HL8 342 aaPredicted RBP6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 NTN4Q9HB63 628 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 SLC17A5Q9NRA2 495 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 TAS2R16Q9NYV7 291 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 PSME2Q9UL46 239 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 ICAM5Q9UMF0 924 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 CHMP2BQ9UQN3 213 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 ACOT9Q9Y305 439 aa6.63□□□□□ -1.35
SMARCE1-217ENST00000580654 ARHGAP32A7KAX9 2087 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 CCDC189A1A4V9 331 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 OR7A17O14581 309 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 ZNF195O14628 629 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 GUCY1B2O75343 617 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 TFP02787 698 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 SAGP10523 405 aaPredicted RBP6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 COL8A2P25067 703 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 GP5P40197 560 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 IL1RL1Q01638 556 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 MGAT5Q09328 741 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 FRG1Q14331 258 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 CD226Q15762 336 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 ZKSCAN8Q15776 578 aaPredicted RBP6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 ELFN2Q5R3F8 820 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 C9orf135Q5VTT2 229 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 OR7E24Q6IFN5 339 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 LEG1Q6P5S2 330 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 VHLLQ6RSH7 139 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 DOK3Q7L591 496 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 PAGE2Q7Z2X7 111 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 GOLGA7Q7Z5G4 137 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 TMEM139Q8IV31 216 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 ZNF527Q8NB42 609 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 SYT14Q8NB59 555 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 ATP6V1C2Q8NEY4 427 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 OR52E4Q8NGH9 312 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 FBXO27Q8NI29 283 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 WFDC12Q8WWY7 111 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 PIK3R3Q92569 461 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 EXOSC8Q96B26 276 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 ZNF48Q96MX3 618 aaPredicted RBP6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 LMF2Q9BU23 707 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 IPPKQ9H8X2 491 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 PFDN4Q9NQP4 134 aa6.62□□□□□ -1.35
SMARCE1-217ENST00000580654 FARSBQ9NSD9 589 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms