RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 PCTPQ9UKL6 214 aa12.15□□□□□ -0.46
CSNK1D-211ENST00000579316 STK38LQ9Y2H1 464 aa12.15□□□□□ -0.46
CSNK1D-211ENST00000579316 WNK1Q9H4A3 2382 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 ALG1L2C9J202 215 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 GMFGO60234 142 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 PLIN3O60664 434 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 PSMG1O95456 288 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 OTCP00480 354 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 PROCP04070 461 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 RPS17P08708 135 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 SBK3P0C264 359 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 EDNRAP25101 427 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 APEX1P27695 318 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 ELK4P28324 431 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 SHC1P29353 583 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 ALDH9A1P49189 494 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 PSMD4P55036 377 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 CARTPTQ16568 116 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 UGT2A3Q6UWM9 527 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 TMEM151AQ8N4L1 468 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 PSD2Q9BQI7 771 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 C1QTNF3Q9BXJ4 246 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 CXorf36Q9H7Y0 433 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 NOL11Q9H8H0 719 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 FKRPQ9H9S5 495 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 Q9N2J8 555 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 PFDN4Q9NQP4 134 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 KLHL9Q9P2J3 617 aa12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 MRTO4Q9UKD2 239 aaKnown RBP12.14□□□□□ -0.47
CSNK1D-211ENST00000579316 NDUFB5O43674 189 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 LILRA1O75019 489 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 SUPT7LO94864 414 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 NGFRP08138 427 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 CPA3P15088 417 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 IMPDH1P20839 514 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 ZNF41P51814 821 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 PRKAA2P54646 552 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 CASP8Q14790 479 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 GRAMD1BQ3KR37 738 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 SH2D4BQ5SQS7 431 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 ZNF678Q5SXM1 525 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 FAM9CQ8IZT9 166 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 ZNF483Q8TF39 744 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 SLC9A6Q92581 669 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 L3HYPDHQ96EM0 354 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 PKNOX2Q96KN3 472 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 COQ10BQ9H8M1 238 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 EMCNQ9ULC0 261 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 PCDHB10Q9UN67 800 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 PCDHGB1Q9Y5G3 927 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 ATP23Q9Y6H3 246 aa12.13□□□□□ -0.47
CSNK1D-211ENST00000579316 A0A087WV62 115 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 OR7A17O14581 309 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 STAMBPO95630 424 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 LINGO3P0C6S8 592 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 ENPP1P22413 925 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 SFTPDP35247 375 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 EIF1P41567 113 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 SNRPD2P62316 118 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 CLCQ05315 142 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 CFAP157Q5JU67 520 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 CDYL2Q8N8U2 506 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 OR52N5Q8NH56 324 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 CDK15Q96Q40 435 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 TMEM237Q96Q45 408 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 JMJD8Q96S16 334 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 SHCBP1LQ9BZQ2 653 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 SAP130Q9H0E3 1048 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 SSU72Q9NP77 194 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 NTMQ9P121 344 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 SLC12A4Q9UP95 1085 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 ACTL7BQ9Y614 415 aa12.12□□□□□ -0.47
CSNK1D-211ENST00000579316 NPIPA5A0A0B4J1W7 369 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 GJE1A6NN92 205 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 ZNF724A8MTY0 619 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 NPIPA7E9PJI5 369 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 G3V2L1 256 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 H3BQF6 201 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 M0R1B8 84 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 EFNA2O43921 213 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 SPAG7O75391 227 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 RAD51DO75771 328 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 SLITRK5O94991 958 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 NPIPA8P0DM63 369 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 DNAJB13P59910 316 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 CHRNEQ04844 493 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 IFT88Q13099 833 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 GGTA1PQ4G0N0 100 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 LIPMQ5VYY2 423 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 TTC19Q6DKK2 380 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 HDXQ7Z353 690 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 CCNYL1Q8N7R7 359 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 ANKS4BQ8N8V4 417 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 TCP10LQ8TDR4 215 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 ZNF75CPQ92670 426 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 EXOSC8Q96B26 276 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 FBXO17Q96EF6 278 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 NSUN5Q96P11 429 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 KLHDC3Q9BQ90 382 aa12.11□□□□□ -0.47
CSNK1D-211ENST00000579316 LMF2Q9BU23 707 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms