RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 TOR1AIP2Q8NFQ8 470 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 ITLN2Q8WWU7 325 aaPredicted RBP19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 TRIB1Q96RU8 372 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 VKORC1Q9BQB6 163 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 BCL2L10Q9HD36 194 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 CMTM6Q9NX76 183 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 THUMPD1Q9NXG2 353 aaKnown RBP19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 SLC35A3Q9Y2D2 325 aa19.58■□□□□ 0.72
CDC42EP4-203ENST00000578516 FAM47E-STBD1D6RA91 191 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 PABPC4LP0CB38 370 aaKnown RBP19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 GLI4P10075 376 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 HOXC5Q00444 222 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 PMPCAQ10713 525 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 LIN52Q52LA3 116 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 REEP3Q6NUK4 255 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 AAGABQ6PD74 315 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 ENPP6Q6UWR7 440 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 CALHM3Q86XJ0 350 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 CCDC71Q8IV32 467 aaPredicted RBP19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 PCYOX1LQ8NBM8 494 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 DNAJA3Q96EY1 480 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 PIGQQ9BRB3 760 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 TTYH2Q9BSA4 534 aa19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 INTS1Q8N201 2190 aaKnown RBP19.57■□□□□ 0.72
CDC42EP4-203ENST00000578516 A0A087WZY1 265 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 CDHR4A6H8M9 788 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 WDR1O75083 606 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 TOXO94900 526 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 SFTPDP35247 375 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 GCKP35557 465 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 SESN3P58005 492 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 CBFBQ13951 182 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 ZNF311Q5JNZ3 666 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 B3GNT6Q6ZMB0 384 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 SERPINA11Q86U17 422 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 C11orf65Q8NCR3 313 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 NAXEQ8NCW5 288 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 HIPK4Q8NE63 616 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 OR8J3Q8NGG0 315 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 ZNF845Q96IR2 970 aaPredicted RBP19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 WFDC6Q9BQY6 131 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 GPATCH1Q9BRR8 931 aaKnown RBP19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 ANGPT4Q9Y264 503 aa19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 GPC6Q9Y625 555 aaPredicted RBP19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 SPTBN1Q01082 2364 aaKnown RBP19.56■□□□□ 0.72
CDC42EP4-203ENST00000578516 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 C7orf72A4D263 438 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 WIPF3A6NGB9 483 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 CLCA1A8K7I4 914 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 NME4O00746 187 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 DNAJA2O60884 412 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 NTN1O95631 604 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 CPN1P15169 458 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 ZNF17P17021 662 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 PCGF2P35227 344 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 CRYBA2P53672 197 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 PCBP3P57721 371 aaKnown RBP19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 DMTNQ08495 405 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 PRAMEF8Q5VWM4 474 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 PRAMEF7Q5VXH5 474 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 HIST2H2BCQ6DN03 193 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 C8orf82Q6P1X6 216 aaPredicted RBP19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 C9orf106Q8NAJ2 232 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 SMYD1Q8NB12 490 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 TNIP2Q8NFZ5 429 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 ZBTB8AQ96BR9 441 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 DTNBP1Q96EV8 351 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 ZNF583Q96ND8 569 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 GID8Q9NWU2 228 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 PACSIN3Q9UKS6 424 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 LRRK2Q5S007 2527 aa19.55■□□□□ 0.72
CDC42EP4-203ENST00000578516 A0A0G2JNJ9 132 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 CLDN1O95832 211 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 THBS1P07996 1170 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 IDH2P48735 452 aaKnown RBP19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 SLC7A2P52569 658 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 PER3P56645 1201 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 EPS8Q12929 822 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 GNA13Q14344 377 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 VMACQ2NL98 169 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 CTU2Q2VPK5 515 aaKnown RBP19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 GLYR1Q49A26 553 aaPredicted RBP19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 RNF220Q5VTB9 566 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 MRGPRGQ86SM5 289 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 SLC15A3Q8IY34 581 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 PM20D2Q8IYS1 436 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 FITM2Q8N6M3 262 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 CCDC197Q8NCU1 140 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 ZNF563Q8TA94 476 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 PHF10Q8WUB8 498 aaKnown RBP19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 OIT3Q8WWZ8 545 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 SDCCAG3Q96C92 435 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 ECSITQ9BQ95 431 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 PRR14Q9BWN1 585 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 SPATA9Q9BWV2 254 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 EXOSC3Q9NQT5 275 aaKnown RBP19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 Q9UFV3 132 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 RNF6Q9Y252 685 aa19.54■□□□□ 0.72
CDC42EP4-203ENST00000578516 A0A0J9YW62 118 aa19.53■□□□□ 0.72
CDC42EP4-203ENST00000578516 EIF1AYO14602 144 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms