RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 MBD3L2Q8NHZ7 208 aaPredicted RBP14.14□□□□□ -0.15
NCBP3-207ENST00000577169 WDR60Q8WVS4 1066 aa14.14□□□□□ -0.15
NCBP3-207ENST00000577169 ANKRD27Q96NW4 1050 aa14.14□□□□□ -0.15
NCBP3-207ENST00000577169 TREX2Q9BQ50 279 aaPredicted RBP14.14□□□□□ -0.15
NCBP3-207ENST00000577169 TRIM8Q9BZR9 551 aa14.14□□□□□ -0.15
NCBP3-207ENST00000577169 FAM107BQ9H098 131 aa14.14□□□□□ -0.15
NCBP3-207ENST00000577169 KLF2Q9Y5W3 355 aaPredicted RBP14.14□□□□□ -0.15
NCBP3-207ENST00000577169 GPC6Q9Y625 555 aaPredicted RBP14.14□□□□□ -0.15
NCBP3-207ENST00000577169 NKX2-6A6NCS4 301 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 FAM90A27PA6NNH2 459 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 PGM3O95394 542 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 ARAFP10398 606 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 NID1P14543 1247 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 PGCP20142 388 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 ADH6P28332 368 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 RYKP34925 604 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 SESN3P58005 492 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 SELPLGQ14242 412 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 CAPRIN1Q14444 709 aaKnown RBP14.13□□□□□ -0.15
NCBP3-207ENST00000577169 MMEL1Q495T6 779 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 SLC25A53Q5H9E4 307 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 CPLX4Q7Z7G2 160 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 GGNQ86UU5 652 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 SNX32Q86XE0 403 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 CMIPQ8IY22 773 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 LILRA2Q8N149 483 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 NAXEQ8NCW5 288 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 NFKBIDQ8NI38 313 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 WNT2BQ93097 391 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 MRGPRX4Q96LA9 322 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 TMEM185BQ9H7F4 350 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 BCL2L10Q9HD36 194 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 ACER3Q9NUN7 267 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 ARMCX1Q9P291 453 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 CLCF1Q9UBD9 225 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 ZNF232Q9UNY5 417 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 CORO2BQ9UQ03 480 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 CAPN7Q9Y6W3 813 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 DSPPQ9NZW4 1301 aa14.13□□□□□ -0.15
NCBP3-207ENST00000577169 A0A0J9YW62 118 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 C5orf58C9J3I9 102 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 C19orf84I3L1E1 186 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 EIF1AYO14602 144 aaKnown RBP14.12□□□□□ -0.15
NCBP3-207ENST00000577169 CCDC22O60826 627 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 ADAM11O75078 769 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 RCBTB2O95199 551 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 NTN1O95631 604 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 TGM6O95932 706 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 SHC1P29353 583 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 AGFG1P52594 562 aaKnown RBP14.12□□□□□ -0.15
NCBP3-207ENST00000577169 ZNF136P52737 540 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 MTPNP58546 118 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 RPS3AP61247 264 aaKnown RBP14.12□□□□□ -0.15
NCBP3-207ENST00000577169 CDK6Q00534 326 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 CYLC2Q14093 348 aaPredicted RBP14.12□□□□□ -0.15
NCBP3-207ENST00000577169 MAPRE2Q15555 327 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 ADRM1Q16186 407 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 SGCBQ16585 318 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 MRPL2Q5T653 305 aaKnown RBP14.12□□□□□ -0.15
NCBP3-207ENST00000577169 PRAMEF8Q5VWM4 474 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 PRAMEF7Q5VXH5 474 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 REP15Q6BDI9 236 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 GRAMD2AQ8IUY3 354 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 METTL25Q8N6Q8 603 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 ATP6V1C2Q8NEY4 427 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 ZNF563Q8TA94 476 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 TMEM234Q8WY98 164 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 FIG4Q92562 907 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 ZNF845Q96IR2 970 aaPredicted RBP14.12□□□□□ -0.15
NCBP3-207ENST00000577169 TM9SF2Q99805 663 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 PINK1Q9BXM7 581 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 TMEM38AQ9H6F2 299 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 KCNJ16Q9NPI9 418 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 EXOSC3Q9NQT5 275 aaKnown RBP14.12□□□□□ -0.15
NCBP3-207ENST00000577169 RLIMQ9NVW2 624 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 DNAJB12Q9NXW2 375 aaKnown RBP14.12□□□□□ -0.15
NCBP3-207ENST00000577169 IFT52Q9Y366 437 aa14.12□□□□□ -0.15
NCBP3-207ENST00000577169 ETV2O00321 342 aaPredicted RBP14.11□□□□□ -0.15
NCBP3-207ENST00000577169 AP3D1O14617 1153 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 MRASO14807 208 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 SLC22A2O15244 555 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 SNX3O60493 162 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 ME2P23368 584 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 CTSSP25774 331 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 SFTPDP35247 375 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 SLC6A8P48029 635 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 IDH2P48735 452 aaKnown RBP14.11□□□□□ -0.15
NCBP3-207ENST00000577169 EEF1A1P68104 462 aaKnown RBP14.11□□□□□ -0.15
NCBP3-207ENST00000577169 LARS2Q15031 903 aaKnown RBP14.11□□□□□ -0.15
NCBP3-207ENST00000577169 CTU2Q2VPK5 515 aaKnown RBP14.11□□□□□ -0.15
NCBP3-207ENST00000577169 TMEM176BQ3YBM2 270 aaPredicted RBP14.11□□□□□ -0.15
NCBP3-207ENST00000577169 LIN52Q52LA3 116 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 ZNF311Q5JNZ3 666 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 NANOGP8Q6NSW7 305 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 REEP3Q6NUK4 255 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 POMZP3Q6PJE2 187 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 ZNF836Q6ZNA1 936 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 P4HA3Q7Z4N8 544 aa14.11□□□□□ -0.15
NCBP3-207ENST00000577169 MTDHQ86UE4 582 aaKnown RBP14.11□□□□□ -0.15
NCBP3-207ENST00000577169 CLIP4Q8N3C7 705 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms