RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 HOXB9P17482 250 aaPredicted RBP21.13■□□□□ 0.97
SNF8-217ENST00000576353 PPIBP23284 216 aaKnown RBP21.13■□□□□ 0.97
SNF8-217ENST00000576353 EIF1AXP47813 144 aaKnown RBP21.13■□□□□ 0.97
SNF8-217ENST00000576353 AGFG1P52594 562 aaKnown RBP21.13■□□□□ 0.97
SNF8-217ENST00000576353 CRISP3P54108 245 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 FADDQ13158 208 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 PON3Q15166 354 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 FBXL19-AS1Q494R0 122 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 PEX5LQ8IYB4 626 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 FAM71CQ8NEG0 241 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 SLC38A5Q8WUX1 472 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 TMEM234Q8WY98 164 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 ST8SIA1Q92185 356 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 FIG4Q92562 907 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 ZNF845Q96IR2 970 aaPredicted RBP21.13■□□□□ 0.97
SNF8-217ENST00000576353 QRSL1Q9H0R6 528 aaKnown RBP21.13■□□□□ 0.97
SNF8-217ENST00000576353 ZNF385DQ9H6B1 395 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 TMEM185BQ9H7F4 350 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 EXOSC3Q9NQT5 275 aaKnown RBP21.13■□□□□ 0.97
SNF8-217ENST00000576353 MRGBPQ9NV56 204 aa21.13■□□□□ 0.97
SNF8-217ENST00000576353 FOXD3Q9UJU5 478 aaPredicted RBP21.13■□□□□ 0.97
SNF8-217ENST00000576353 PCNX3Q9H6A9 2034 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 ARHGAP21Q5T5U3 1957 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 ETV2O00321 342 aaPredicted RBP21.12■□□□□ 0.97
SNF8-217ENST00000576353 NTN1O95631 604 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 OPN1LWP04000 364 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 DBIP07108 87 aaKnown RBP21.12■□□□□ 0.97
SNF8-217ENST00000576353 IL7RP16871 459 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 PEX19P40855 299 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 PAGE3Q5JUK9 113 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 HMGN2P46Q86SG4 172 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 DMRTC2Q8IXT2 367 aaPredicted RBP21.12■□□□□ 0.97
SNF8-217ENST00000576353 GCNT2Q8N0V5 402 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 OR10D3Q8NH80 312 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 OR2V1Q8NHB1 315 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 FNDC9Q8TBE3 224 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 TSPEARQ8WU66 669 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 RNASE6Q93091 150 aaKnown RBP21.12■□□□□ 0.97
SNF8-217ENST00000576353 KLHL15Q96M94 604 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 PRRG4Q9BZD6 226 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 PIGMQ9H3S5 423 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 SLC25A37Q9NYZ2 338 aa21.12■□□□□ 0.97
SNF8-217ENST00000576353 EEF1E1-BLOC1S5C9J1V9 151 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 EEF1E1O43324 174 aaKnown RBP21.11■□□□□ 0.97
SNF8-217ENST00000576353 BCHEP06276 602 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 IL11P20809 199 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 RPS4Y1P22090 263 aaKnown RBP21.11■□□□□ 0.97
SNF8-217ENST00000576353 UQCRC1P31930 480 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 SLC6A8P48029 635 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 ARFIP2P53365 341 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 MAPK11Q15759 364 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 CTU2Q2VPK5 515 aaKnown RBP21.11■□□□□ 0.97
SNF8-217ENST00000576353 HBMQ6B0K9 141 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 GDF7Q7Z4P5 450 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 WDR60Q8WVS4 1066 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 ADGRG7Q96K78 797 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 RNF122Q9H9V4 155 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 CACYBPQ9HB71 228 aaKnown RBP21.11■□□□□ 0.97
SNF8-217ENST00000576353 TIGARQ9NQ88 270 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 JKAMPQ9P055 326 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 SLAMF8Q9P0V8 285 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 LEF1Q9UJU2 399 aaPredicted RBP21.11■□□□□ 0.97
SNF8-217ENST00000576353 MCTS1Q9ULC4 181 aaKnown RBP21.11■□□□□ 0.97
SNF8-217ENST00000576353 CORO2BQ9UQ03 480 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 NDUFAF1Q9Y375 327 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 GMEB1Q9Y692 573 aa21.11■□□□□ 0.97
SNF8-217ENST00000576353 NOTCH2Q04721 2471 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 A0A0G2JPF8 293 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 A0A0J9YW62 118 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 HNRNPCL2B2RXH8 293 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 HNRNPCL3B7ZW38 293 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 TNFSF11O14788 317 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 ANGPT2O15123 496 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 EFNA2O43921 213 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 HNRNPCL1O60812 293 aaKnown RBP21.1■□□□□ 0.97
SNF8-217ENST00000576353 SYNGR4O95473 234 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 HNRNPCL4P0DMR1 293 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 BMP2P12643 396 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 PRF1P14222 555 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 NID1P14543 1247 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 SFTPDP35247 375 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 MDH1P40925 334 aaKnown RBP21.1■□□□□ 0.97
SNF8-217ENST00000576353 CARD18P57730 90 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 SESN3P58005 492 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 SELENBP1Q13228 472 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 MSRB3Q8IXL7 192 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 ZNF563Q8TA94 476 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 OSTF1Q92882 214 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 ZNF524Q96C55 264 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 TRIM8Q9BZR9 551 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 A4GALTQ9NPC4 353 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 SERINC1Q9NRX5 453 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 ACER3Q9NUN7 267 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 PACSIN3Q9UKS6 424 aa21.1■□□□□ 0.97
SNF8-217ENST00000576353 DSPPQ9NZW4 1301 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 A0A1W2PNV4 684 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 CLDN24A6NM45 220 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 EVPLLA8MZ36 301 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 CXCL13O43927 109 aa21.09■□□□□ 0.97
SNF8-217ENST00000576353 TNFSF13O75888 250 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms