RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 OR2B2Q9GZK3 357 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 SLC6A15Q9H2J7 730 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 ARMC7Q9H6L4 198 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 MED17Q9NVC6 651 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 TAS2R10Q9NYW0 307 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 DKKL1Q9UK85 242 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 VDAC3Q9Y277 283 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 RPH3AQ9Y2J0 694 aaPredicted RBP7.77□□□□□ -1.17
NUP88-211ENST00000575976 SLC6A5Q9Y345 797 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 MRPS18CQ9Y3D5 142 aaKnown RBP7.77□□□□□ -1.17
NUP88-211ENST00000575976 DOPEY1Q5JWR5 2465 aa7.77□□□□□ -1.17
NUP88-211ENST00000575976 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 A0A1B0GTH9 108 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 A0A1B0GVC2 190 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 CFAP73A6NFT4 308 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 FAM47E-STBD1D6RA91 191 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 M0R3H8 397 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 SYT5O00445 386 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 ARPC2O15144 300 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 GMNNO75496 209 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 LGI1O95970 557 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 SERPINA1P01009 418 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 FESP07332 822 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 C8BP07358 591 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 LINGO3P0C6S8 592 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 PGCP20142 388 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 TNFRSF1BP20333 461 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 SLC6A8P48029 635 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 IDH2P48735 452 aaKnown RBP7.76□□□□□ -1.17
NUP88-211ENST00000575976 ZNF41P51814 821 aaPredicted RBP7.76□□□□□ -1.17
NUP88-211ENST00000575976 ZNF136P52737 540 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 SESN3P58005 492 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 B3GALT5-AS1P59052 145 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 SELENOWP63302 87 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 HOXC5Q00444 222 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 MS4A2Q01362 244 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 TLE1Q04724 770 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 EPS8Q12929 822 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 BNIP2Q12982 314 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 ELOAQ14241 798 aaKnown RBP7.76□□□□□ -1.17
NUP88-211ENST00000575976 GANABQ14697 944 aaKnown RBP7.76□□□□□ -1.17
NUP88-211ENST00000575976 QPRTQ15274 297 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 NRF1Q16656 503 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 PLPPR5Q32ZL2 321 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 C4orf17Q53FE4 359 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 KRTCAP3Q53RY4 240 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 RAET1LQ5VY80 246 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 PGM2L1Q6PCE3 622 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 CBLL1Q75N03 491 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 ASRGL1Q7L266 308 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 ZNF550Q7Z398 422 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 SPPL2CQ8IUH8 684 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 LACC1Q8IV20 430 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 ZNF440Q8IYI8 595 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 OR4D11Q8NGI4 311 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 ZNF563Q8TA94 476 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 VANGL1Q8TAA9 524 aaPredicted RBP7.76□□□□□ -1.17
NUP88-211ENST00000575976 NEIL3Q8TAT5 605 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 POC1BQ8TC44 478 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 RASSF5Q8WWW0 418 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 DTNBP1Q96EV8 351 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 ARHGDIGQ99819 225 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 PRR14Q9BWN1 585 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 LRMDAQ9H2I8 198 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 LDAHQ9H6V9 325 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 EXO5Q9H790 373 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 GORASP2Q9H8Y8 452 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 KLHL28Q9NXS3 571 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 MAGEL2Q9UJ55 1249 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 SLC13A4Q9UKG4 626 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 SNX13Q9Y5W8 968 aa7.76□□□□□ -1.17
NUP88-211ENST00000575976 PCNX3Q9H6A9 2034 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 A0A087WZY1 265 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 OR2M5A3KFT3 312 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 AQP7O14520 342 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 SUSD5O60279 629 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 TPST2O60704 377 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 HCN1O60741 890 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 ZNF682O95780 498 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 EDN3P14138 238 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 PRKCAP17252 672 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 ATP6V1B2P21281 511 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 PSMA4P25789 261 aaKnown RBP7.75□□□□□ -1.17
NUP88-211ENST00000575976 OR1E2P47887 323 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 STARP49675 285 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 GFRA1P56159 465 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 RGS8P57771 180 aaPredicted RBP7.75□□□□□ -1.17
NUP88-211ENST00000575976 FOXF1Q12946 379 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 TRIM25Q14258 630 aaKnown RBP7.75□□□□□ -1.17
NUP88-211ENST00000575976 IGFBP7Q16270 282 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 TMEM44Q2T9K0 475 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 GLYR1Q49A26 553 aaPredicted RBP7.75□□□□□ -1.17
NUP88-211ENST00000575976 SLC25A53Q5H9E4 307 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 GFRALQ6UXV0 394 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 CYP2R1Q6VVX0 501 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 FGD2Q7Z6J4 655 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 VTCN1Q7Z7D3 282 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 LSRQ86X29 649 aaPredicted RBP7.75□□□□□ -1.17
NUP88-211ENST00000575976 CARM1Q86X55 608 aa7.75□□□□□ -1.17
NUP88-211ENST00000575976 RBM45Q8IUH3 476 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms