RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 LRRC58Q96CX6 371 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 RNF145Q96MT1 663 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 NPAS1Q99742 590 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 SH3GL1Q99961 368 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 QRSL1Q9H0R6 528 aaKnown RBP11.96□□□□□ -0.49
RPAIN-216ENST00000575599 CALHM2Q9HA72 323 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 TPT1P8Q9HAU6 139 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 SLC52A3Q9NQ40 469 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 KCNE5Q9UJ90 142 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 L3MBTL1Q9Y468 752 aa11.96□□□□□ -0.49
RPAIN-216ENST00000575599 MBD3L4A6NDZ8 208 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-216ENST00000575599 MBD3L3A6NE82 208 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-216ENST00000575599 MBD3L5A6NJ08 208 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-216ENST00000575599 ZNF264O43296 627 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 HNRNPRO43390 633 aaKnown RBP11.95□□□□□ -0.5
RPAIN-216ENST00000575599 CSTAP01040 98 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 UBTFL6P0CB48 400 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-216ENST00000575599 ZCCHC18P0CG32 403 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 NR2F1P10589 423 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 CEACAM8P31997 349 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-216ENST00000575599 CRATP43155 626 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 AGFG1P52594 562 aaKnown RBP11.95□□□□□ -0.5
RPAIN-216ENST00000575599 SUCLG1P53597 346 aaKnown RBP11.95□□□□□ -0.5
RPAIN-216ENST00000575599 CLDN20P56880 219 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 PSME3P61289 254 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 NCALDP61601 193 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 TXNL4AP83876 142 aaKnown RBP11.95□□□□□ -0.5
RPAIN-216ENST00000575599 CHRNEQ04844 493 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 FOXF1Q12946 379 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 ZNF141Q15928 474 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 BCL2A1Q16548 175 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 SYPL1Q16563 259 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 TMEM44Q2T9K0 475 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 P4HA3Q7Z4N8 544 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 ARPINQ7Z6K5 226 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 DEFB107AQ8IZN7 70 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 PGAM4Q8N0Y7 254 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 GTPBP8Q8N3Z3 284 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-216ENST00000575599 MBD3L2Q8NHZ7 208 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-216ENST00000575599 ARSGQ96EG1 525 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 TMEM185BQ9H7F4 350 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 POLE3Q9NRF9 147 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 TAS2R1Q9NYW7 299 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 ADA2Q9NZK5 511 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 CLCF1Q9UBD9 225 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 ICAM5Q9UMF0 924 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 PCDHB14Q9Y5E9 798 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 AP4B1Q9Y6B7 739 aa11.95□□□□□ -0.5
RPAIN-216ENST00000575599 EVPLLA8MZ36 301 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 EIF1AYO14602 144 aaKnown RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 DVL2O14641 736 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 DNAJC8O75937 253 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 OPN1LWP04000 364 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 CHRM4P08173 479 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 LINGO3P0C6S8 592 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 TMIGD3P0DMS9 266 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 ETFAP13804 333 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 PPIBP23284 216 aaKnown RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 PGM1P36871 562 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 ZNF136P52737 540 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 MVDP53602 400 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 SUMO3P55854 103 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 CLDN15P56746 228 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 EEFSECP57772 596 aaKnown RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 DSTNP60981 165 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 TFF3Q07654 80 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 CBFBQ13951 182 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 CAPRIN1Q14444 709 aaKnown RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 TOMM34Q15785 309 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 MAPK14Q16539 360 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 SLC25A35Q3KQZ1 300 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 PPP4R4Q6NUP7 873 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 EIF3MQ7L2H7 374 aaKnown RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 ADGRE4PQ86SQ3 457 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 GCNT2Q8N0V5 402 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 RELL2Q8NC24 303 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 TOR1AIP2Q8NFQ8 470 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 POC1BQ8TC44 478 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 SLC7A6OSQ96CW6 309 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 ZNF845Q96IR2 970 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 TRNT1Q96Q11 434 aaKnown RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 RAB3IPQ96QF0 476 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 CGREF1Q99674 301 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 TM9SF2Q99805 663 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 THTPAQ9BU02 230 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 THUMPD3Q9BV44 507 aaKnown RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 PINK1Q9BXM7 581 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 PAIP1Q9H074 479 aaKnown RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 LRMDAQ9H2I8 198 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 NPDC1Q9NQX5 325 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-216ENST00000575599 P2RX2Q9UBL9 471 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 LIPT1Q9Y234 373 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 AP3M1Q9Y2T2 418 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 DOCK7Q96N67 2140 aa11.94□□□□□ -0.5
RPAIN-216ENST00000575599 C7orf72A4D263 438 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 SLC22A20A6NK97 555 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 EIF4E2O60573 245 aaKnown RBP11.93□□□□□ -0.5
RPAIN-216ENST00000575599 TGM6O95932 706 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 BCHEP06276 602 aa11.93□□□□□ -0.5
RPAIN-216ENST00000575599 GUSBP08236 651 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms