RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 DNAJA1P31689 397 aaKnown RBP21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 P2RX1P51575 399 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 OR1C1Q15619 314 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 LRRC69Q6ZNQ3 347 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 GDF7Q7Z4P5 450 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 OR4C15Q8NGM1 316 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 OR5W2Q8NH69 310 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 TRIM2Q9C040 744 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 TMEM27Q9HBJ8 222 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 SACM1LQ9NTJ5 587 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 SLC7A7Q9UM01 511 aa21.92■■□□□ 1.1
ATPAF1-213ENST00000574428 IGF2RP11717 2491 aa21.91■■□□□ 1.1
ATPAF1-213ENST00000574428 TRAPPC13A5PLN9 417 aa21.91■■□□□ 1.1
ATPAF1-213ENST00000574428 NTN1O95631 604 aa21.91■■□□□ 1.1
ATPAF1-213ENST00000574428 SLC6A8P48029 635 aa21.91■■□□□ 1.1
ATPAF1-213ENST00000574428 IDH2P48735 452 aaKnown RBP21.91■■□□□ 1.1
ATPAF1-213ENST00000574428 KCNAB2Q13303 367 aa21.91■■□□□ 1.1
ATPAF1-213ENST00000574428 LSMEM1Q8N8F7 131 aa21.91■■□□□ 1.1
ATPAF1-213ENST00000574428 TOR1AIP2Q8NFQ8 470 aa21.91■■□□□ 1.1
ATPAF1-213ENST00000574428 OR5K1Q8NHB7 308 aa21.91■■□□□ 1.1
ATPAF1-213ENST00000574428 NR4A3Q92570 626 aa21.91■■□□□ 1.1
ATPAF1-213ENST00000574428 LOC400499M0QZD8 3231 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 HEATR5AQ86XA9 2040 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 A0A1B0GWA3 101 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 G3V2T6 193 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 CEACAM4O75871 244 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 UQCRBP14927 111 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 FPR1P21462 350 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 ELAVL4P26378 380 aaKnown RBP21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 IFNA8P32881 189 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 LIMS1P48059 325 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 COPZ1P61923 177 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 CBFBQ13951 182 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 TOMM34Q15785 309 aaPredicted RBP21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 SHQ1Q6PI26 577 aaKnown RBP21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 TBPL2Q6SJ96 375 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 UNQ6494/PRO21346Q6UXR6 183 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 ZDHHC13Q8IUH4 622 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 WDSUB1Q8N9V3 476 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 RNF217Q8TC41 542 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 FRMD6Q96NE9 622 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 POLR2J2Q9GZM3 115 aaKnown RBP21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 POLR2J3Q9H1A7 115 aaKnown RBP21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 TIMMDC1Q9NPL8 285 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 EML6Q6ZMW3 1958 aa21.9■■□□□ 1.1
ATPAF1-213ENST00000574428 A0A1W2PRQ8 180 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 ANKRD33BA6NCL7 494 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 OR5H15A6NDH6 313 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 K7ENP7 123 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 CDC40O60508 579 aaKnown RBP eCLIP21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 SLC25A12O75746 678 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 MST1P26927 711 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 DNASE1L1P49184 302 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 SMIM11AP58511 58 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 ST3GAL3Q11203 375 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 DGCR6Q14129 220 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 OTUD3Q5T2D3 398 aaPredicted RBP21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 ZNF613Q6PF04 617 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 INO80CQ6PI98 192 aaPredicted RBP21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 STK32CQ86UX6 486 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 SVOPLQ8N434 492 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 CBR4Q8N4T8 237 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 ZNF563Q8TA94 476 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 SLC7A13Q8TCU3 470 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 NTNG2Q96CW9 530 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 ALPK1Q96QP1 1244 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 HES7Q9BYE0 225 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 DSN1Q9H410 356 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 COQ10BQ9H8M1 238 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 RPS6KB2Q9UBS0 482 aa21.89■■□□□ 1.1
ATPAF1-213ENST00000574428 IGLV3-32A0A0A0MS00 114 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 A0A0B4J2E0 115 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 A0A1B0GX12 115 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 SOCS2O14508 198 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 GNB5O14775 395 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 LYPD3O95274 346 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 PTNP21246 168 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 PRKACGP22612 351 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 HMGA2P52926 109 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 GPR85P60893 370 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 ARG2P78540 354 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 TRAM2Q15035 370 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 SEC23BQ15437 767 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 GPR119Q8TDV5 335 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 JSRP1Q96MG2 331 aaPredicted RBP21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 SLC29A1Q99808 456 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 C9orf16Q9BUW7 83 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 DEPPQ9NTK1 212 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 PDP1Q9P0J1 537 aaPredicted RBP21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 FBXL2Q9UKC9 423 aa21.89■■□□□ 1.09
ATPAF1-213ENST00000574428 TAF4O00268 1085 aa21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 ZNF26P17031 533 aaPredicted RBP21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 PGCP20142 388 aa21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 MASP1P48740 699 aa21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 WBP2NLQ6ICG8 309 aa21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 PODNL1Q6PEZ8 512 aa21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 ZBTB49Q6ZSB9 765 aa21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 NKAIN4Q8IVV8 208 aa21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 GALNT4Q8N4A0 578 aa21.88■■□□□ 1.09
ATPAF1-213ENST00000574428 SDCCAG3Q96C92 435 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms