RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 CD276Q5ZPR3 534 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 VN1R4Q7Z5H5 301 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 LUZP2Q86TE4 346 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 CYB561A3Q8NBI2 242 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 OR11H4Q8NGC9 324 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 OR13C5Q8NGS8 318 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 OR51A7Q8NH64 312 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 SMPDL3BQ92485 455 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 YIPF5Q969M3 257 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 GAL3ST3Q96A11 431 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 OR2M2Q96R28 347 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.49□□□□□ -0.09
NUP88-207ENST00000573584 ERVMER34-1Q9H9K5 563 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 ADGRL4Q9HBW9 690 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 SERGEFQ9UGK8 458 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 FBXL4Q9UKA2 621 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 ELF5Q9UKW6 265 aaPredicted RBP14.49□□□□□ -0.09
NUP88-207ENST00000573584 NPFFR2Q9Y5X5 522 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 A0A1W2PPK0 400 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 RIIAD1A6NNX1 92 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 BTN3A3O00478 584 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 BMP8BP34820 402 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 SRP54P61011 504 aaKnown RBP14.49□□□□□ -0.09
NUP88-207ENST00000573584 TRMT12Q53H54 448 aaKnown RBP14.49□□□□□ -0.09
NUP88-207ENST00000573584 FAM78AQ5JUQ0 283 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 RPL13AP3Q6NVV1 102 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 GET4Q7L5D6 327 aaPredicted RBP14.49□□□□□ -0.09
NUP88-207ENST00000573584 BMP8AQ7Z5Y6 402 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 OR8H3Q8N146 312 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 SLC44A3Q8N4M1 653 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 HDDC3Q8N4P3 179 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 ZNF680Q8NEM1 530 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 OR4E2Q8NGC2 313 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 OR5J2Q8NH18 312 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 OR4C6Q8NH72 309 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 SLC35A3Q9Y2D2 325 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 SCN3AQ9NY46 2000 aa14.49□□□□□ -0.09
NUP88-207ENST00000573584 TRAV27A0A087WT01 109 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 NPIPA5A0A0B4J1W7 369 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 A0A1W2PRG6 482 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 NPIPA7E9PJI5 369 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 UBL3O95164 117 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 DBIP07108 87 aaKnown RBP14.48□□□□□ -0.09
NUP88-207ENST00000573584 NPIPA8P0DM63 369 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 DGCR2P98153 550 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 TNFRSF17Q02223 184 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 GARNL3Q5VVW2 1013 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 MS4A15Q8N5U1 240 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 ARSGQ96EG1 525 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 ZNF350Q9GZX5 532 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 MAT2BQ9NZL9 334 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 THAP10Q9P2Z0 257 aaPredicted RBP14.48□□□□□ -0.09
NUP88-207ENST00000573584 SIGLEC7Q9Y286 467 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 SNRNP200O75643 2136 aaKnown RBP14.48□□□□□ -0.09
NUP88-207ENST00000573584 A0A0B4J203 849 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 PEX12O00623 359 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 STX11O75558 287 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 GYPBP06028 91 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 SYPP08247 313 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 SNRPBP14678 240 aaKnown RBP14.48□□□□□ -0.09
NUP88-207ENST00000573584 NDUFS1P28331 727 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 CCR6P51684 374 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 NRG3P56975 720 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 RGS1Q08116 209 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 CRMP1Q14194 572 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 CST6Q15828 149 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 DMKNQ6E0U4 476 aaPredicted RBP14.48□□□□□ -0.09
NUP88-207ENST00000573584 SDE2Q6IQ49 451 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 TMPRSS11FQ6ZWK6 438 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 SYT9Q86SS6 491 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 SAMD14Q8IZD0 417 aaPredicted RBP14.48□□□□□ -0.09
NUP88-207ENST00000573584 ZNF619Q8N2I2 560 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 DACT3Q96B18 629 aaPredicted RBP14.48□□□□□ -0.09
NUP88-207ENST00000573584 ADAP2Q9NPF8 381 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 FBXO34Q9NWN3 711 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 MED31Q9Y3C7 131 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 MDC1Q14676 2089 aaKnown RBP14.48□□□□□ -0.09
NUP88-207ENST00000573584 DOCK9Q9BZ29 2069 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 A0A1W2PP55 124 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 LYPD3O95274 346 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 PEPDP12955 493 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 NID1P14543 1247 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 ATF1P18846 271 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 MMP15P51511 669 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 PITPNAQ00169 270 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 C7orf57Q8NEG2 295 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 OR4D9Q8NGE8 314 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 KCMF1Q9P0J7 381 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 COPZ2Q9P299 210 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 KCNE5Q9UJ90 142 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 TMEM5Q9Y2B1 443 aa14.48□□□□□ -0.09
NUP88-207ENST00000573584 MUC22E2RYF6 1773 aaPredicted RBP14.47□□□□□ -0.09
NUP88-207ENST00000573584 TBC1D3EA0A087X179 549 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 ID2Q02363 134 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 DEFB134Q4QY38 66 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 DCST2Q5T1A1 773 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 FAAH2Q6GMR7 532 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 SSX6Q7RTT6 188 aa14.47□□□□□ -0.09
NUP88-207ENST00000573584 C12orf76Q8N812 135 aaPredicted RBP14.47□□□□□ -0.09
NUP88-207ENST00000573584 TEX19Q8NA77 164 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms