RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 OR2V1Q8NHB1 315 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 FNDC9Q8TBE3 224 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 SLC38A5Q8WUX1 472 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 WDR60Q8WVS4 1066 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 ZNF524Q96C55 264 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 LRRC46Q96FV0 321 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 MRGPRX4Q96LA9 322 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 SFXN3Q9BWM7 321 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 PRRG4Q9BZD6 226 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 ZNF385DQ9H6B1 395 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 CALML5Q9NZT1 146 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 ZNF175Q9Y473 711 aa18.59■□□□□ 0.57
CHMP6-204ENST00000572778 A0A0J9YW62 118 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 TNFSF11O14788 317 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 CXCL13O43927 109 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 PRF1P14222 555 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 ELK4P28324 431 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 UQCRC1P31930 480 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 RYKP34925 604 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 MDH1P40925 334 aaKnown RBP18.58■□□□□ 0.56
CHMP6-204ENST00000572778 ASCL1P50553 236 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 CRISP3P54108 245 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 FADDQ13158 208 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 PDSS1Q5T2R2 415 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 OR2A2Q6IF42 318 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 CGB2Q6NT52 195 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 ESPNLQ6ZVH7 1005 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 MSRB3Q8IXL7 192 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 PEX5LQ8IYB4 626 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 FAM71CQ8NEG0 241 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 ZNF563Q8TA94 476 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 CNOT9Q92600 299 aaKnown RBP18.58■□□□□ 0.56
CHMP6-204ENST00000572778 PMM1Q92871 262 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 KLHL15Q96M94 604 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 CCDC134Q9H6E4 229 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.58■□□□□ 0.56
CHMP6-204ENST00000572778 LEF1Q9UJU2 399 aaPredicted RBP18.58■□□□□ 0.56
CHMP6-204ENST00000572778 NDUFAF1Q9Y375 327 aa18.58■□□□□ 0.56
CHMP6-204ENST00000572778 ANGPT2O15123 496 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 EFNA2O43921 213 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 DBIP07108 87 aaKnown RBP18.57■□□□□ 0.56
CHMP6-204ENST00000572778 NUDT7P0C024 238 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 PPIBP23284 216 aaKnown RBP18.57■□□□□ 0.56
CHMP6-204ENST00000572778 SHC1P29353 583 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 SESN3P58005 492 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 CTU2Q2VPK5 515 aaKnown RBP18.57■□□□□ 0.56
CHMP6-204ENST00000572778 SLC25A53Q5H9E4 307 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 RPS26P11Q5JNZ5 115 aaPredicted RBP18.57■□□□□ 0.56
CHMP6-204ENST00000572778 HBMQ6B0K9 141 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 DMRTC2Q8IXT2 367 aaPredicted RBP18.57■□□□□ 0.56
CHMP6-204ENST00000572778 CMIPQ8IY22 773 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 CNEP1R1Q8N9A8 125 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 ACBD4Q8NC06 268 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 TMEM234Q8WY98 164 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 ST8SIA1Q92185 356 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 TMEM19Q96HH6 336 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 ADGRG7Q96K78 797 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 PAQR5Q9NXK6 330 aaPredicted RBP18.57■□□□□ 0.56
CHMP6-204ENST00000572778 VAPAQ9P0L0 249 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 MCTS1Q9ULC4 181 aaKnown RBP18.57■□□□□ 0.56
CHMP6-204ENST00000572778 KIAA1549Q9HCM3 1950 aa18.57■□□□□ 0.56
CHMP6-204ENST00000572778 PCNX3Q9H6A9 2034 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 A0A1W2PNV4 684 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 GJE1A6NN92 205 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 SYT5O00445 386 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 ADAMDEC1O15204 470 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 DNAJA2O60884 412 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 SYNGR4O95473 234 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 NTN1O95631 604 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 IGFBP2P18065 325 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 RPS4Y1P22090 263 aaKnown RBP18.56■□□□□ 0.56
CHMP6-204ENST00000572778 DLX5P56178 289 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 MERTKQ12866 999 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 TMEM176BQ3YBM2 270 aaPredicted RBP18.56■□□□□ 0.56
CHMP6-204ENST00000572778 LUZP2Q86TE4 346 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 VRK2Q86Y07 508 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 OR52P1PQ8NH57 321 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 OSTF1Q92882 214 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 RNASE6Q93091 150 aaKnown RBP18.56■□□□□ 0.56
CHMP6-204ENST00000572778 MAL2Q969L2 176 aa18.56■□□□□ 0.56
CHMP6-204ENST00000572778 TREX2Q9BQ50 279 aaPredicted RBP18.56■□□□□ 0.56
CHMP6-204ENST00000572778 CACYBPQ9HB71 228 aaKnown RBP18.56■□□□□ 0.56
CHMP6-204ENST00000572778 EXOSC3Q9NQT5 275 aaKnown RBP18.56■□□□□ 0.56
CHMP6-204ENST00000572778 UNC79Q9P2D8 2635 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 A0A0G2JPF8 293 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 EVPLLA8MZ36 301 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 HNRNPCL2B2RXH8 293 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 HNRNPCL3B7ZW38 293 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 C5orf58C9J3I9 102 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 HNRNPCL1O60812 293 aaKnown RBP18.55■□□□□ 0.56
CHMP6-204ENST00000572778 AQP8O94778 261 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 CRHP06850 196 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 HNRNPCL4P0DMR1 293 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 FCGR2AP12318 317 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 NID1P14543 1247 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 SLC6A8P48029 635 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 CARD18P57730 90 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 EEF1A1P68104 462 aaKnown RBP18.55■□□□□ 0.56
CHMP6-204ENST00000572778 SIRPAP78324 504 aa18.55■□□□□ 0.56
CHMP6-204ENST00000572778 PLAURQ03405 335 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms