RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 RSL1D1O76021 490 aaKnown RBP17.48■□□□□ 0.39
CCDC40-206ENST00000572083 IGHV3-9P01782 118 aa17.48■□□□□ 0.39
CCDC40-206ENST00000572083 SNRPAP09012 282 aaKnown RBP17.48■□□□□ 0.39
CCDC40-206ENST00000572083 PRKCAP17252 672 aa17.48■□□□□ 0.39
CCDC40-206ENST00000572083 EFNA1P20827 205 aaPredicted RBP17.48■□□□□ 0.39
CCDC40-206ENST00000572083 CD40P25942 277 aa17.48■□□□□ 0.39
CCDC40-206ENST00000572083 LCN1P31025 176 aa17.48■□□□□ 0.39
CCDC40-206ENST00000572083 GZMKP49863 264 aa17.48■□□□□ 0.39
CCDC40-206ENST00000572083 P2RX1P51575 399 aa17.48■□□□□ 0.39
CCDC40-206ENST00000572083 RAC3P60763 192 aa17.48■□□□□ 0.39
CCDC40-206ENST00000572083 POU6F2P78424 691 aaPredicted RBP17.48■□□□□ 0.39
CCDC40-206ENST00000572083 SELENBP1Q13228 472 aa17.48■□□□□ 0.39
CCDC40-206ENST00000572083 GGTLC2Q14390 218 aa17.48■□□□□ 0.39
CCDC40-206ENST00000572083 ARL13AQ5H913 290 aaPredicted RBP17.48■□□□□ 0.39
CCDC40-206ENST00000572083 SSX8Q7RTT4 187 aa17.48■□□□□ 0.39
CCDC40-206ENST00000572083 ZFP28Q8NHY6 868 aa17.48■□□□□ 0.39
CCDC40-206ENST00000572083 ZNF75CPQ92670 426 aaPredicted RBP17.48■□□□□ 0.39
CCDC40-206ENST00000572083 ICAM5Q9UMF0 924 aa17.48■□□□□ 0.39
CCDC40-206ENST00000572083 LOC100289279A0A1B0GTE1 492 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 M0R1B8 84 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 AKAP10O43572 662 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 CYTIPO60759 359 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 CSF3P09919 207 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 PTAFRP25105 342 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 EFNA4P52798 201 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.47■□□□□ 0.39
CCDC40-206ENST00000572083 C8orf74Q6P047 294 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 KLHL17Q6TDP4 642 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 LRIG3Q6UXM1 1119 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 MTERF4Q7Z6M4 381 aaKnown RBP17.47■□□□□ 0.39
CCDC40-206ENST00000572083 GALNT5Q7Z7M9 940 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 RELL1Q8IUW5 271 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 CCNYL1Q8N7R7 359 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 RFWD2Q8NHY2 731 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 GPR119Q8TDV5 335 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 CDS1Q92903 461 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 C3orf49Q96BT1 292 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 BTBD2Q9BX70 525 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 ANKZF1Q9H8Y5 726 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 EML4Q9HC35 981 aaKnown RBP17.47■□□□□ 0.39
CCDC40-206ENST00000572083 PYCARDQ9ULZ3 195 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 ACTL7BQ9Y614 415 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 SLC25A15Q9Y619 301 aa17.47■□□□□ 0.39
CCDC40-206ENST00000572083 CIB4A0PJX0 185 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 WIPF1O43516 503 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 SEC22BO75396 215 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 H6PDO95479 791 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 HNF1AP20823 631 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 EXOSC6Q5RKV6 272 aaKnown RBP17.46■□□□□ 0.39
CCDC40-206ENST00000572083 TRIM46Q7Z4K8 759 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 UBE2J2Q8N2K1 259 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 TMCO5AQ8N6Q1 288 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 ZNF614Q8N883 585 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 ZNF527Q8NB42 609 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 CLHC1Q8NHS4 586 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 PPCDCQ96CD2 204 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 MSI2Q96DH6 328 aaKnown RBP17.46■□□□□ 0.39
CCDC40-206ENST00000572083 MRGPRX4Q96LA9 322 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 OR5B2Q96R09 309 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 INPP5KQ9BT40 448 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 IQCGQ9H095 443 aaKnown RBP17.46■□□□□ 0.39
CCDC40-206ENST00000572083 SH3BP4Q9P0V3 963 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 PTGDR2Q9Y5Y4 395 aa17.46■□□□□ 0.39
CCDC40-206ENST00000572083 CCT8L1PA6NM43 557 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 ZNF724A8MTY0 619 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 CRCPO75575 148 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 ATP6V1C1P21283 382 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 FRKP42685 505 aaPredicted RBP17.45■□□□□ 0.38
CCDC40-206ENST00000572083 CCR4P51679 360 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 SUMO3P55854 103 aaPredicted RBP17.45■□□□□ 0.38
CCDC40-206ENST00000572083 RUNX1T1Q06455 604 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 LASP1Q14847 261 aaKnown RBP17.45■□□□□ 0.38
CCDC40-206ENST00000572083 KIAA0040Q15053 153 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 KLHL26Q53HC5 615 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 ZNF544Q6NX49 715 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 DEPDC4Q8N2C3 294 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 FAM120BQ96EK7 910 aaKnown RBP17.45■□□□□ 0.38
CCDC40-206ENST00000572083 TSSK3Q96PN8 268 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 PRR14Q9BWN1 585 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 C1QTNF6Q9BXI9 259 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 TNFRSF12AQ9NP84 129 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 RRAGDQ9NQL2 400 aaPredicted RBP17.45■□□□□ 0.38
CCDC40-206ENST00000572083 TRAF6Q9Y4K3 522 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 ATP23Q9Y6H3 246 aa17.45■□□□□ 0.38
CCDC40-206ENST00000572083 H3BNH8 94 aa17.44■□□□□ 0.38
CCDC40-206ENST00000572083 GTPBP1O00178 669 aaKnown RBP17.44■□□□□ 0.38
CCDC40-206ENST00000572083 KIAA0513O60268 411 aa17.44■□□□□ 0.38
CCDC40-206ENST00000572083 HSPA4LO95757 839 aa17.44■□□□□ 0.38
CCDC40-206ENST00000572083 HMGN2P05204 90 aaKnown RBP17.44■□□□□ 0.38
CCDC40-206ENST00000572083 APEHP13798 732 aaKnown RBP17.44■□□□□ 0.38
CCDC40-206ENST00000572083 FBXW9Q5XUX1 488 aa17.44■□□□□ 0.38
CCDC40-206ENST00000572083 CDC73Q6P1J9 531 aa17.44■□□□□ 0.38
CCDC40-206ENST00000572083 C3orf33Q6P1S2 294 aa17.44■□□□□ 0.38
CCDC40-206ENST00000572083 ZCCHC12Q6PEW1 402 aa17.44■□□□□ 0.38
CCDC40-206ENST00000572083 ZNF764Q96H86 408 aaPredicted RBP17.44■□□□□ 0.38
CCDC40-206ENST00000572083 PIMREGQ9BSJ6 248 aa17.44■□□□□ 0.38
CCDC40-206ENST00000572083 QRSL1Q9H0R6 528 aaKnown RBP17.44■□□□□ 0.38
CCDC40-206ENST00000572083 REEP4Q9H6H4 257 aa17.44■□□□□ 0.38
CCDC40-206ENST00000572083 DUSP22Q9NRW4 184 aa17.44■□□□□ 0.38
CCDC40-206ENST00000572083 ZCCHC3Q9NUD5 404 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms