RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 ELK4P28324 431 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 IL12AP29459 219 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 AGTR1P30556 359 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 CHI3L1P36222 383 aaPredicted RBP12.28□□□□□ -0.44
RAB40B-204ENST00000571554 EIF1P41567 113 aaKnown RBP12.28□□□□□ -0.44
RAB40B-204ENST00000571554 SUMO3P55854 103 aaPredicted RBP12.28□□□□□ -0.44
RAB40B-204ENST00000571554 ADAM8P78325 824 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 FUT5Q11128 374 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 MAPK14Q16539 360 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 ARHGAP11BQ3KRB8 267 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 ALKBH2Q6NS38 261 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 WFDC11Q8NEX6 87 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 TOR1AIP2Q8NFQ8 470 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 OR5W2Q8NH69 310 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 MBD6Q96DN6 1003 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 MARK4Q96L34 752 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 SLC35A5Q9BS91 424 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 COQ10BQ9H8M1 238 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 PLSCR4Q9NRQ2 329 aa12.28□□□□□ -0.44
RAB40B-204ENST00000571554 PAQR5Q9NXK6 330 aaPredicted RBP12.28□□□□□ -0.44
RAB40B-204ENST00000571554 GPC6Q9Y625 555 aaPredicted RBP12.28□□□□□ -0.44
RAB40B-204ENST00000571554 SETD2Q9BYW2 2564 aaPredicted RBP12.27□□□□□ -0.44
RAB40B-204ENST00000571554 VPS13CQ709C8 3753 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 DUXAA6NLW8 204 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 E9PBE3 544 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 GOSR1O95249 250 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 GSNP06396 782 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 THBDP07204 575 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 ENPP1P22413 925 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 EPHA3P29320 983 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 S100A3P33764 101 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 CDKN2CP42773 168 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 CLNS1AP54105 237 aaKnown RBP12.27□□□□□ -0.45
RAB40B-204ENST00000571554 RIPPLY3P57055 190 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 MAGOHP61326 146 aaKnown RBP12.27□□□□□ -0.45
RAB40B-204ENST00000571554 SKP2Q13309 424 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 CBFBQ13951 182 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 CASP8Q14790 479 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 TSC22D1Q15714 1073 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 ZNF141Q15928 474 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 GPAT3Q53EU6 434 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 ANXA8L1Q5VT79 327 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 SAXO2Q658L1 398 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 TYW3Q6IPR3 259 aaKnown RBP12.27□□□□□ -0.45
RAB40B-204ENST00000571554 STAC2Q6ZMT1 411 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 NUFIP2Q7Z417 695 aaKnown RBP12.27□□□□□ -0.45
RAB40B-204ENST00000571554 TUSC5Q8IXB3 177 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 PNPT1Q8TCS8 783 aaKnown RBP12.27□□□□□ -0.45
RAB40B-204ENST00000571554 RNF128Q8TEB7 428 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 ZFP90Q8TF47 636 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 TESCQ96BS2 214 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 REXO5Q96IC2 774 aaKnown RBP12.27□□□□□ -0.45
RAB40B-204ENST00000571554 INPP5KQ9BT40 448 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 NMUR2Q9GZQ4 415 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 ZNF350Q9GZX5 532 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 EXD2Q9NVH0 621 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 AIG1Q9NVV5 245 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 ACANP16112 2415 aa12.27□□□□□ -0.45
RAB40B-204ENST00000571554 PRAMEF27A3QJZ7 478 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 CLDN24A6NM45 220 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 KIAA0513O60268 411 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 EIF4E2O60573 245 aaKnown RBP12.26□□□□□ -0.45
RAB40B-204ENST00000571554 SOX30O94993 753 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 SNUPNO95149 360 aaKnown RBP12.26□□□□□ -0.45
RAB40B-204ENST00000571554 H6PDO95479 791 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 AK1P00568 194 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 CSTAP01040 98 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 ADH6P28332 368 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 SLC7A1P30825 629 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 RYKP34925 604 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 KHKP50053 298 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 SELENBP1Q13228 472 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 TIGD2Q4W5G0 525 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 ATAD3BQ5T9A4 648 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 NXNQ6DKJ4 435 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 HEPHL1Q6MZM0 1159 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 DNAJC14Q6Y2X3 702 aaPredicted RBP12.26□□□□□ -0.45
RAB40B-204ENST00000571554 FCRLAQ7L513 359 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.26□□□□□ -0.45
RAB40B-204ENST00000571554 RNF130Q86XS8 419 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 WFDC8Q8IUA0 241 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 VPS37AQ8NEZ2 397 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 CPNE4Q96A23 557 aaPredicted RBP12.26□□□□□ -0.45
RAB40B-204ENST00000571554 ZNF775Q96BV0 537 aaPredicted RBP12.26□□□□□ -0.45
RAB40B-204ENST00000571554 ROPN1LQ96C74 230 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 ZG16BQ96DA0 208 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 MRGPRX4Q96LA9 322 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 OR5B2Q96R09 309 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 LAT2Q9GZY6 243 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 GSX1Q9H4S2 264 aaPredicted RBP12.26□□□□□ -0.45
RAB40B-204ENST00000571554 TIGARQ9NQ88 270 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 WDR45Q9Y484 360 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 FREM1Q5H8C1 2179 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 PRR14LQ5THK1 2151 aa12.26□□□□□ -0.45
RAB40B-204ENST00000571554 FLNAP21333 2647 aaKnown RBP12.25□□□□□ -0.45
RAB40B-204ENST00000571554 CCDC154A6NI56 674 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 GJE1A6NN92 205 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 NID1P14543 1247 aa12.25□□□□□ -0.45
RAB40B-204ENST00000571554 LOXP28300 417 aaPredicted RBP12.25□□□□□ -0.45
RAB40B-204ENST00000571554 PCYT1AP49585 367 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms