RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 CLCA1A8K7I4 914 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 BBIP1A8MTZ0 92 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 TMEM229AB2RXF0 380 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 C19orf84I3L1E1 186 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 GTPBP1O00178 669 aaKnown RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 ETV2O00321 342 aaPredicted RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 AIM2O14862 343 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 SLC22A2O15244 555 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 SEC14L5O43304 696 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 EIF4E2O60573 245 aaKnown RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 TPST2O60704 377 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 CCDC22O60826 627 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 TGM6O95932 706 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 ACTL6AO96019 429 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 OPN1SWP03999 348 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 PABPC4LP0CB38 370 aaKnown RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 PEPDP12955 493 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 NID1P14543 1247 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 CPN1P15169 458 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 SLC6A2P23975 617 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 MSX1P28360 303 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 ADSLP30566 484 aaPredicted RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 RYKP34925 604 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 ACAA2P42765 397 aaKnown RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 MAGEA8P43361 318 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 SLC6A8P48029 635 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 HCFC1P51610 2035 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 CRISP3P54108 245 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 PCBP3P57721 371 aaKnown RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 SESN3P58005 492 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 TXNL4AP83876 142 aaKnown RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 HPCAP84074 193 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 HOXC5Q00444 222 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 DMTNQ08495 405 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 FOXF2Q12947 444 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 SCARB2Q14108 478 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 GANABQ14697 944 aaKnown RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.29□□□□□ -1.4
SMG6-209ENST00000571442 SLC25A53Q5H9E4 307 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 COQ5Q5HYK3 327 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 POMZP3Q6PJE2 187 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 MRGPRGQ86SM5 289 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 SERPINA11Q86U17 422 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 TSPYL5Q86VY4 417 aaPredicted RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 LACC1Q8IV20 430 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 SLC15A3Q8IY34 581 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 UBQLNLQ8IYU4 475 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 GPR32P1Q8NGA4 272 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 OR4D11Q8NGI4 311 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 RP9Q8TA86 221 aaKnown RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 PHF10Q8WUB8 498 aaKnown RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 FIG4Q92562 907 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 DNAJA3Q96EY1 480 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 ZNF583Q96ND8 569 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 TRIB1Q96RU8 372 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 SRXN1Q9BYN0 137 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 UCK2Q9BZX2 261 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 NSRP1Q9H0G5 558 aaKnown RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 PTGES2Q9H7Z7 377 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 COQ10BQ9H8M1 238 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 MTHFD2LQ9H903 347 aaPredicted RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 CLCF1Q9UBD9 225 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 Q9UFV3 132 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 PACSIN3Q9UKS6 424 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 RNF6Q9Y252 685 aa6.29□□□□□ -1.4
SMG6-209ENST00000571442 GPC6Q9Y625 555 aaPredicted RBP6.29□□□□□ -1.4
SMG6-209ENST00000571442 A0A087WZY1 265 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 A0A0G2JPF8 293 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 A0A1W2PNR3 127 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 FIGNL2A6NMB9 653 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 EVPLLA8MZ36 301 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 AHRRA9YTQ3 701 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 HNRNPCL2B2RXH8 293 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 HNRNPCL3B7ZW38 293 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 H0Y3Z8 333 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 NME4O00746 187 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 TNFSF11O14788 317 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 HNRNPCL1O60812 293 aaKnown RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 WDR1O75083 606 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 AQP8O94778 261 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 MFN2O95140 757 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 NUDT14O95848 222 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 FAM107AO95990 144 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 DBIP07108 87 aaKnown RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 THBS1P07996 1170 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 HNRNPCL4P0DMR1 293 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 ESRRAP11474 423 aaPredicted RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 IL7RP16871 459 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 ZNF17P17021 662 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 POU3F2P20265 443 aaPredicted RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 CD247P20963 164 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 PPIBP23284 216 aaKnown RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 HTR2AP28223 471 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 CEACAM8P31997 349 aaPredicted RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 SFTPDP35247 375 aa6.28□□□□□ -1.4
SMG6-209ENST00000571442 IDH2P48735 452 aaKnown RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 ANXA11P50995 505 aaKnown RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 ZNF41P51814 821 aaPredicted RBP6.28□□□□□ -1.4
SMG6-209ENST00000571442 AGFG1P52594 562 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms