RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 ELK4P28324 431 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 EIF1P41567 113 aaKnown RBP12.05□□□□□ -0.48
RPAIN-207ENST00000570883 CRATP43155 626 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 SLC6A8P48029 635 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 ASCL1P50553 236 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 ANXA11P50995 505 aaKnown RBP12.05□□□□□ -0.48
RPAIN-207ENST00000570883 EEFSECP57772 596 aaKnown RBP12.05□□□□□ -0.48
RPAIN-207ENST00000570883 RAC1P63000 192 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 GUCY1A3Q02108 690 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 PON3Q15166 354 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 QPRTQ15274 297 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 FBXL19-AS1Q494R0 122 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 LRIF1Q5T3J3 769 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 LRRC74BQ6ZQY2 392 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 EIF3MQ7L2H7 374 aaKnown RBP12.05□□□□□ -0.48
RPAIN-207ENST00000570883 LSRQ86X29 649 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-207ENST00000570883 DMRTC2Q8IXT2 367 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-207ENST00000570883 C10orf111Q8N326 155 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 TOR1AIP2Q8NFQ8 470 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 OR10D3Q8NH80 312 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 FBXO27Q8NI29 283 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 SIKE1Q9BRV8 207 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 THUMPD3Q9BV44 507 aaKnown RBP12.05□□□□□ -0.48
RPAIN-207ENST00000570883 SFXN3Q9BWM7 321 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 MED4Q9NPJ6 270 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 TMEM45AQ9NWC5 275 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 JKAMPQ9P055 326 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 ZNF175Q9Y473 711 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 GPC6Q9Y625 555 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-207ENST00000570883 DSPPQ9NZW4 1301 aa12.05□□□□□ -0.48
RPAIN-207ENST00000570883 CSMD1Q96PZ7 3565 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 PRR14LQ5THK1 2151 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 A0A1W2PNV4 684 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 TNFSF11O14788 317 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 ADAMDEC1O15204 470 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 AQP8O94778 261 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 BCHEP06276 602 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 NUDT7P0C024 238 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 TFPTP0C1Z6 253 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 NR2F1P10589 423 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 NCF2P19878 526 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-207ENST00000570883 OPRM1P35372 400 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 EIF1AXP47813 144 aaKnown RBP12.04□□□□□ -0.48
RPAIN-207ENST00000570883 DSTNP60981 165 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 IRX1P78414 480 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-207ENST00000570883 KCNJ10P78508 379 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 SNTB1Q13884 538 aaKnown RBP12.04□□□□□ -0.48
RPAIN-207ENST00000570883 CBFBQ13951 182 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 RGNQ15493 299 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 HSP90B2PQ58FF3 399 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 SLC25A53Q5H9E4 307 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 RPS26P11Q5JNZ5 115 aaPredicted RBP12.04□□□□□ -0.48
RPAIN-207ENST00000570883 CHMP1BQ7LBR1 199 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 ARFGAP2Q8N6H7 521 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 SLC38A5Q8WUX1 472 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 CNOT9Q92600 299 aaKnown RBP12.04□□□□□ -0.48
RPAIN-207ENST00000570883 MRGPRX4Q96LA9 322 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 TMEM120AQ9BXJ8 343 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 RNF122Q9H9V4 155 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 VAPAQ9P0L0 249 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 P2RX2Q9UBL9 471 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 SLC35A3Q9Y2D2 325 aa12.04□□□□□ -0.48
RPAIN-207ENST00000570883 MYO9AB2RTY4 2548 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 A0A1W2PP18 115 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 EEF1E1-BLOC1S5C9J1V9 151 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 CLIC1O00299 241 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 SYT5O00445 386 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 EEF1E1O43324 174 aaKnown RBP12.03□□□□□ -0.48
RPAIN-207ENST00000570883 CXCL13O43927 109 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 BMP2P12643 396 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 NID1P14543 1247 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 ME2P23368 584 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 ADH6P28332 368 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 SFTPDP35247 375 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 SESN3P58005 492 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 RPS3AP61247 264 aaKnown RBP12.03□□□□□ -0.48
RPAIN-207ENST00000570883 SF3A3Q12874 501 aaKnown RBP eCLIP12.03□□□□□ -0.48
RPAIN-207ENST00000570883 GUSBP1Q15486 140 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 VWA1Q6PCB0 445 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 ESPNLQ6ZVH7 1005 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 P4HA3Q7Z4N8 544 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 GDF7Q7Z4P5 450 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 RETREG3Q86VR2 466 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 LILRA2Q8N149 483 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 OR2V1Q8NHB1 315 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 ST8SIA1Q92185 356 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 RNASE6Q93091 150 aaKnown RBP12.03□□□□□ -0.48
RPAIN-207ENST00000570883 MAL2Q969L2 176 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 TMEM19Q96HH6 336 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 KLHL15Q96M94 604 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 IKZF5Q9H5V7 419 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 CCDC134Q9H6E4 229 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 COQ10BQ9H8M1 238 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 MTHFD2LQ9H903 347 aaPredicted RBP12.03□□□□□ -0.48
RPAIN-207ENST00000570883 EXOSC3Q9NQT5 275 aaKnown RBP12.03□□□□□ -0.48
RPAIN-207ENST00000570883 DNAJB12Q9NXW2 375 aaKnown RBP12.03□□□□□ -0.48
RPAIN-207ENST00000570883 TRIM33Q9UPN9 1127 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 OTOGQ6ZRI0 2925 aa12.03□□□□□ -0.48
RPAIN-207ENST00000570883 CCDC168Q8NDH2 2452 aa12.02□□□□□ -0.48
RPAIN-207ENST00000570883 AP3D1O14617 1153 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms