RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 NTN4Q9HB63 628 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 MED11Q9P086 117 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 ICAM5Q9UMF0 924 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 U3KQV3 271 aa14.06□□□□□ -0.16
HERPUD1-219ENST00000570273 KMT2BQ9UMN6 2715 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 DSPP15924 2871 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 A0A087WV48 116 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 IGLV3-32A0A0A0MS00 114 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 A0A1B0GWA3 101 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 CDC40O60508 579 aaKnown RBP eCLIP14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 DPM1O60762 260 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 SNX4O95219 450 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 GADD45GO95257 159 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 ZNF23P17027 643 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 FPR1P21462 350 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 MSX1P28360 303 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 IDH2P48735 452 aaKnown RBP14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 GPR85P60893 370 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 CXADRP78310 365 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 INPP5JQ15735 1006 aaPredicted RBP14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 EXOC3L2Q2M3D2 409 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 COLEC12Q5KU26 742 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 ZNF613Q6PF04 617 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 PLCZ1Q86YW0 608 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 MDS2Q8NDY4 140 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 OR52J3Q8NH60 311 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 RNF217Q8TC41 542 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 TMEM41AQ96HV5 264 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 DHRS1Q96LJ7 313 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 KLHDC3Q9BQ90 382 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 HES7Q9BYE0 225 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 DSN1Q9H410 356 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 PROK2Q9HC23 129 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 TAS2R10Q9NYW0 307 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 SELENONQ9NZV5 590 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 OAZ3Q9UMX2 235 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 LYVE1Q9Y5Y7 322 aa14.05□□□□□ -0.16
HERPUD1-219ENST00000570273 URB1O60287 2271 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 A0A0B4J2E0 115 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 A0A1B0GX12 115 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 FAM47E-STBD1D6RA91 191 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 FAAHO00519 579 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 GP1BBP13224 206 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 CD46P15529 392 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 CNR1P21554 472 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 PEX2P28328 305 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 DNAJA1P31689 397 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 ST3GAL3Q11203 375 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 KCNAB2Q13303 367 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 TRAM2Q15035 370 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 QPRTQ15274 297 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 WBP2NLQ6ICG8 309 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 IGFL2Q6UWQ7 119 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 GDF7Q7Z4P5 450 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 FADS6Q8N9I5 356 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 OR2M3Q8NG83 312 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 OR5K1Q8NHB7 308 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 GPR119Q8TDV5 335 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 HAS2Q92819 552 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 SDCCAG3Q96C92 435 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 NTNG2Q96CW9 530 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 FRMD6Q96NE9 622 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 EPYCQ99645 322 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 SMAD5Q99717 465 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 RASSF4Q9H2L5 321 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 KLHL1Q9NR64 748 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 ACER3Q9NUN7 267 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 SLC7A7Q9UM01 511 aa14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 KLF13Q9Y2Y9 288 aaPredicted RBP14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 PCDHGA9Q9Y5G4 932 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-219ENST00000570273 A0A1W2PRQ8 180 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 B4DXG7 233 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 CASQ2O14958 399 aaPredicted RBP14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 NME2P1O60361 137 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 TRIM3O75382 744 aaPredicted RBP14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 THY1P04216 161 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 THRBP10828 461 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 FUT4P22083 530 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 NME2P22392 152 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 ELAVL4P26378 380 aaKnown RBP14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 ZNF41P51814 821 aaPredicted RBP14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 DGCR6Q14129 220 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 GK3PQ14409 553 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 LAPTM4AQ15012 233 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 TOMM34Q15785 309 aaPredicted RBP14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 TBR1Q16650 682 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 LPCAT4Q643R3 524 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 SLC25A25Q6KCM7 469 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 TMEM179BQ7Z7N9 219 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 EPHX4Q8IUS5 362 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 SVOPLQ8N434 492 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 LSMEM1Q8N8F7 131 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 WDSUB1Q8N9V3 476 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 OR4C15Q8NGM1 316 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 OR1J4Q8NGS1 313 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 TM9SF4Q92544 642 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 EME1Q96AY2 570 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 ALPK1Q96QP1 1244 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 CIB1Q99828 191 aa14.03□□□□□ -0.16
HERPUD1-219ENST00000570273 FAM173AQ9BQD7 235 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms