RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 KPNA4O00629 521 aaPredicted RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 ITGB1BP1O14713 200 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 TNFAIP8O95379 198 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 CNIH1O95406 144 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ANXA2P07355 339 aaKnown RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 FBLP22087 321 aaKnown RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 GRIA3P42263 894 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ULK3Q6PHR2 472 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 P4HA3Q7Z4N8 544 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 SYVN1Q86TM6 617 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 SPAG16Q8N0X2 631 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 DYNC2LI1Q8TCX1 351 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 UBTD2Q8WUN7 234 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ZHX1-C8orf76Q96EF9 292 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ACSS3Q9H6R3 686 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 C1GALT1Q9NS00 363 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 LIPGQ9Y5X9 500 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 ACTL7AQ9Y615 435 aa6.19□□□□□ -1.42
SMG1-217ENST00000569764 TCF20Q9UGU0 1960 aaKnown RBP6.19□□□□□ -1.42
SMG1-217ENST00000569764 BET1O15155 118 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 SNAI2O43623 268 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 ENSAO43768 121 aaKnown RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 OR2C1O95371 312 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 S1PR4O95977 384 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 CTPS1P17812 591 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 GSTM3P21266 225 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 FEN1P39748 380 aaKnown RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 VHLP40337 213 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 PAFAH1B3Q15102 231 aaKnown RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 GSTA3Q16772 222 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 IMPG1Q17R60 797 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 KLHL12Q53G59 568 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 PDLIM3Q53GG5 364 aaPredicted RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 PNCKQ6P2M8 343 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 ABHD13Q7L211 337 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 PIGWQ7Z7B1 504 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 YRDCQ86U90 279 aaKnown RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 TMEM17Q86X19 198 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 PQLC1Q8N2U9 271 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 GPX8Q8TED1 209 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 BCL2L2Q92843 193 aaPredicted RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 FBXW5Q969U6 566 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 TSACCQ96A04 125 aaPredicted RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 GRIP2Q9C0E4 1043 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 KCNK9Q9NPC2 374 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 SLC5A6Q9Y289 635 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 MIA3Q5JRA6 1907 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 COL6A3P12111 3177 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 ANKRD66B4E2M5 251 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 KLRC4-KLRK1H3BQV0 150 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 CTDSPLO15194 276 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 C8orf89P0DMQ9 161 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 AHRP35869 848 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 UGT8Q16880 541 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 PROX2Q3B8N5 592 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 RGS7BPQ6MZT1 257 aaPredicted RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 ASB18Q6ZVZ8 466 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 LHFPL4Q7Z7J7 247 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 ZNF683Q8IZ20 524 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 FAM109AQ8N4B1 249 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 SIRT6Q8N6T7 355 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 CHDHQ8NE62 594 aaPredicted RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 C16orf78Q8WTQ4 265 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 WBP2Q969T9 261 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 HOPXQ9BPY8 73 aaPredicted RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 UTP23Q9BRU9 249 aaKnown RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 DEFB126Q9BYW3 111 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 TMEM138Q9NPI0 162 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 PRELID3BQ9Y3B1 194 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 TRAV25A0A0B4J276 109 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 CLEC18AA5D8T8 446 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 DUXAA6NLW8 204 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 ADAMDEC1O15204 470 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 OBSL1O75147 1896 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 EFEMP2O95967 443 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 BGNP21810 368 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 MTNR1BP49286 362 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 DIO3P55073 304 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 WNT3AP56704 352 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 ACSM1Q08AH1 577 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 PPP1R8Q12972 351 aaKnown RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 PODNL1Q6PEZ8 512 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 CLEC18BQ6UXF7 455 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 CIR1Q86X95 450 aaPredicted RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 TDRPQ86YL5 185 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 AQP12AQ8IXF9 295 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 SYT14Q8NB59 555 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 CLEC18CQ8NCF0 446 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 SPATA22Q8NHS9 363 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 TBC1D15Q8TC07 691 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 DAZLQ92904 295 aaKnown RBP6.18□□□□□ -1.42
SMG1-217ENST00000569764 TCTN2Q96GX1 697 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 LMLNQ96KR4 655 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 SLC22A12Q96S37 553 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 DUSP26Q9BV47 211 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 ELOVL1Q9BW60 279 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 PKIBQ9C010 78 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 C20orf27Q9GZN8 174 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 IL22Q9GZX6 179 aa6.18□□□□□ -1.42
SMG1-217ENST00000569764 RAB1BQ9H0U4 201 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms