RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 MDH1P40925 334 aaKnown RBP9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 DLX5P56178 289 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 DSTNP60981 165 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 RPS3AP61247 264 aaKnown RBP9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 KCNJ10P78508 379 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 HPCAP84074 193 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 FOXF1Q12946 379 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 FOXF2Q12947 444 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 FADDQ13158 208 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 QPRTQ15274 297 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 RGNQ15493 299 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 FBXL19-AS1Q494R0 122 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 DLEU7Q6UYE1 221 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 CHMP1BQ7LBR1 199 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 GRAMD2AQ8IUY3 354 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 FBXO27Q8NI29 283 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 TSPEARQ8WU66 669 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 SLC38A5Q8WUX1 472 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 SMPDL3BQ92485 455 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 FIG4Q92562 907 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 ZNF845Q96IR2 970 aaPredicted RBP9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 MRGPRX4Q96LA9 322 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 THUMPD3Q9BV44 507 aaKnown RBP9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 TMEM120AQ9BXJ8 343 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 EXOSC3Q9NQT5 275 aaKnown RBP9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 THUMPD1Q9NXG2 353 aaKnown RBP9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 JKAMPQ9P055 326 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 VAPAQ9P0L0 249 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 ZNF175Q9Y473 711 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 DSPPQ9NZW4 1301 aa9.96□□□□□ -0.82
SHCBP1-207ENST00000569702 A0A0J9YW62 118 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 EIF1AYO14602 144 aaKnown RBP9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 CYP7B1O75881 506 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 CRHP06850 196 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 VIMP08670 466 aaKnown RBP9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 NUDT7P0C024 238 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 PRF1P14222 555 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 NID1P14543 1247 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 ASCL1P50553 236 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 CRISP3P54108 245 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 EEF1A1P68104 462 aaKnown RBP9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 EEF1A1P5Q5VTE0 462 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 OR2A2Q6IF42 318 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 ESPNLQ6ZVH7 1005 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 HMGN2P46Q86SG4 172 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 DMRTC2Q8IXT2 367 aaPredicted RBP9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 CMIPQ8IY22 773 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 ZNF295-AS1Q8N0V1 137 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 GCNT2Q8N0V5 402 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 LILRA2Q8N149 483 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 DPP10Q8N608 796 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 TMCO5AQ8N6Q1 288 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 OR10D3Q8NH80 312 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 FNDC9Q8TBE3 224 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 ST8SIA1Q92185 356 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 CNOT9Q92600 299 aaKnown RBP9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 INTS12Q96CB8 462 aaKnown RBP9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 ZNF317Q96PQ6 595 aaPredicted RBP9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 SFXN3Q9BWM7 321 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 PINK1Q9BXM7 581 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 TRIM8Q9BZR9 551 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 RAD21L1Q9H4I0 556 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 RNF122Q9H9V4 155 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 A4GALTQ9NPC4 353 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 PAQR5Q9NXK6 330 aaPredicted RBP9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 CALML5Q9NZT1 146 aa9.95□□□□□ -0.82
SHCBP1-207ENST00000569702 A0A0G2JPF8 293 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 A0A1W2PNV4 684 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 HNRNPCL2B2RXH8 293 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 HNRNPCL3B7ZW38 293 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 HNRNPCL1O60812 293 aaKnown RBP9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 ADAM11O75078 769 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 TNFSF13O75888 250 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 OPN1LWP04000 364 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 BCHEP06276 602 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 DBIP07108 87 aaKnown RBP9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 SNRPB2P08579 225 aaKnown RBP9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 HNRNPCL4P0DMR1 293 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 IL7RP16871 459 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 GPX2P18283 190 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 PGCP20142 388 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 PPIBP23284 216 aaKnown RBP9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 ME2P23368 584 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 SHC1P29353 583 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 EIF1AXP47813 144 aaKnown RBP9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 CCR4P51679 360 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 AGFG1P52594 562 aaKnown RBP9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 ARFIP2P53365 341 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 SESN3P58005 492 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 GNA13Q14344 377 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 PON3Q15166 354 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 GUSBP1Q15486 140 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 SGCBQ16585 318 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 PRAMEF8Q5VWM4 474 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 PRAMEF7Q5VXH5 474 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 MEX3BQ6ZN04 569 aaKnown RBP9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 P4HA3Q7Z4N8 544 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 RETREG3Q86VR2 466 aa9.94□□□□□ -0.82
SHCBP1-207ENST00000569702 MCEMP1Q8IX19 187 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms