RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	KISS1R	Q969F8	398 aa	Predicted RBP	11.73	□□□□□ -0.53
PKM-222	ENST00000568883	CREB3L1	Q96BA8	519 aa		11.73	□□□□□ -0.53
PKM-222	ENST00000568883	CTHRC1	Q96CG8	243 aa		11.73	□□□□□ -0.53
PKM-222	ENST00000568883	DCLRE1C	Q96SD1	692 aa	Known RBP	11.73	□□□□□ -0.53
PKM-222	ENST00000568883	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.73	□□□□□ -0.53
PKM-222	ENST00000568883	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.73	□□□□□ -0.53	2e-7	■■■□□ 18.9
PKM-222	ENST00000568883	FOLH1B	Q9HBA9	442 aa		11.73	□□□□□ -0.53
PKM-222	ENST00000568883	ATP13A2	Q9NQ11	1180 aa		11.73	□□□□□ -0.53
PKM-222	ENST00000568883	CYSLTR2	Q9NS75	346 aa		11.73	□□□□□ -0.53
PKM-222	ENST00000568883	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.73	□□□□□ -0.53
PKM-222	ENST00000568883	C20orf141	Q9NUB4	165 aa		11.73	□□□□□ -0.53
PKM-222	ENST00000568883	ING3	Q9NXR8	418 aa		11.73	□□□□□ -0.53
PKM-222	ENST00000568883	MALT1	Q9UDY8	824 aa		11.73	□□□□□ -0.53
PKM-222	ENST00000568883	NUFIP1	Q9UHK0	495 aa	Known RBP	11.73	□□□□□ -0.53
PKM-222	ENST00000568883	NOX1	Q9Y5S8	564 aa		11.73	□□□□□ -0.53
PKM-222	ENST00000568883	HS3ST3A1	Q9Y663	406 aa		11.73	□□□□□ -0.53
PKM-222	ENST00000568883	SBK2	P0C263	348 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	DRD1	P21728	446 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	CTH	P32929	405 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	ACTA2	P62736	377 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	ACTG2	P63267	376 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	TATDN3	Q17R31	274 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.72	□□□□□ -0.53
PKM-222	ENST00000568883	ARMC6	Q6NXE6	501 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	ARL9	Q6T311	187 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	OAF	Q86UD1	273 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	SLC7A5P1	Q8MH63	180 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	SLC44A3	Q8N4M1	653 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883		Q8N9G6	341 aa	Predicted RBP	11.72	□□□□□ -0.53
PKM-222	ENST00000568883	TEX19	Q8NA77	164 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	HOXB13	Q92826	284 aa	Predicted RBP	11.72	□□□□□ -0.53
PKM-222	ENST00000568883	ART5	Q96L15	291 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	DMRTB1	Q96MA1	342 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	HDHD2	Q9H0R4	259 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	OR51V1	Q9H2C8	321 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	MED20	Q9H944	212 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	CPNE7	Q9UBL6	633 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	RPS6KB2	Q9UBS0	482 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	MYO7A	Q13402	2215 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	NIN	Q8N4C6	2090 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883		H0Y8X5	98 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	ARHGEF9	O43307	516 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	NARS	O43776	548 aa	Known RBP	11.72	□□□□□ -0.53
PKM-222	ENST00000568883	PTP4A3	O75365	173 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	EGF	P01133	1207 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	EN2	P19622	333 aa	Predicted RBP	11.72	□□□□□ -0.53
PKM-222	ENST00000568883	ALAS2	P22557	587 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	TCEA1	P23193	301 aa	Known RBP	11.72	□□□□□ -0.53
PKM-222	ENST00000568883	RABIF	P47224	123 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	RFX3	P48380	749 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	NRG3	P56975	720 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	LGALS3BP	Q08380	585 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	MGAT2	Q10469	447 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	FZD5	Q13467	585 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	EXOSC7	Q15024	291 aa	Known RBP	11.72	□□□□□ -0.53
PKM-222	ENST00000568883	P2RY14	Q15391	338 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	VASH1	Q7L8A9	365 aa	Predicted RBP	11.72	□□□□□ -0.53
PKM-222	ENST00000568883	LIX1L	Q8IVB5	337 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	CMIP	Q8IY22	773 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	LSMEM1	Q8N8F7	131 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	POMGNT2	Q8NAT1	580 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	ADAMTS18	Q8TE60	1221 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	SMPDL3B	Q92485	455 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	TRIM63	Q969Q1	353 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	RFT1	Q96AA3	541 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	MRGPRX1	Q96LB2	322 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	TBX5	Q99593	518 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	MARVELD1	Q9BSK0	173 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	LMF2	Q9BU23	707 aa	Known RBP	11.72	□□□□□ -0.53
PKM-222	ENST00000568883	RPP25	Q9BUL9	199 aa	Known RBP	11.72	□□□□□ -0.53
PKM-222	ENST00000568883	NIPAL2	Q9H841	368 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	B3GAT2	Q9NPZ5	323 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	HRASLS2	Q9NWW9	162 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	KCNE5	Q9UJ90	142 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	MRPS33	Q9Y291	106 aa	Known RBP	11.72	□□□□□ -0.53
PKM-222	ENST00000568883	CA5B	Q9Y2D0	317 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883	NPFFR2	Q9Y5X5	522 aa		11.72	□□□□□ -0.53
PKM-222	ENST00000568883		A0A1B0GWA3	101 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	SHISA3	A0PJX4	238 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883		A8MV72	311 aa	Predicted RBP	11.71	□□□□□ -0.53
PKM-222	ENST00000568883	ARL6IP5	O75915	188 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	CHRNB1	P11230	501 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	ELK1	P19419	428 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	NPR2	P20594	1047 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	SLC2A5	P22732	501 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	RCVRN	P35243	200 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	PITPNB	P48739	271 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	GPR143	P51810	404 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	BTG1	P62324	171 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	PYHIN1	Q6K0P9	492 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	SFXN4	Q6P4A7	337 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	CEACAM19	Q7Z692	300 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	UBE2J2	Q8N2K1	259 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	OR52R1	Q8NGF1	315 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	LILRB4	Q8NHJ6	448 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	ABHD4	Q8TB40	342 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	GPBAR1	Q8TDU6	330 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	GRHL3	Q8TE85	626 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	PTP4A1	Q93096	173 aa		11.71	□□□□□ -0.53
PKM-222	ENST00000568883	SENP5	Q96HI0	755 aa	Predicted RBP	11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms