RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	LRIG3	Q6UXM1	1119 aa		13.93	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ZYG11A	Q6WRX3	759 aa		13.93	□□□□□ -0.18
HERPUD1-215	ENST00000568676		Q6ZSR9	355 aa		13.93	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ATG4D	Q86TL0	474 aa	Predicted RBP	13.93	□□□□□ -0.18
HERPUD1-215	ENST00000568676	DEPDC4	Q8N2C3	294 aa		13.93	□□□□□ -0.18
HERPUD1-215	ENST00000568676	FBXO30	Q8TB52	745 aa		13.93	□□□□□ -0.18
HERPUD1-215	ENST00000568676	JADE3	Q92613	823 aa		13.93	□□□□□ -0.18
HERPUD1-215	ENST00000568676	KCNK17	Q96T54	332 aa		13.93	□□□□□ -0.18
HERPUD1-215	ENST00000568676	DHRS9	Q9BPW9	319 aa		13.93	□□□□□ -0.18
HERPUD1-215	ENST00000568676	PRR14L	Q5THK1	2151 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	OR5H1	A6NKK0	313 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676		G3V2L1	256 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676		H7C417	338 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	GTPBP1	O00178	669 aa	Known RBP	13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	GPRIN2	O60269	458 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	EIF4E2	O60573	245 aa	Known RBP	13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	GLRA3	O75311	464 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	NTN1	O95631	604 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	HMGN2	P05204	90 aa	Known RBP	13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ENPP1	P22413	925 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	GCA	P28676	217 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ECHS1	P30084	290 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	RPL3	P39023	403 aa	Known RBP	13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CASP9	P55211	416 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	WHAMMP3	Q1A5X7	153 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CCNJ	Q5T5M9	372 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	C1QTNF12	Q5T7M4	302 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ANKRD26P1	Q6NSI1	321 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CDC73	Q6P1J9	531 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CBLN3	Q6UW01	205 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	TRMT10C	Q7L0Y3	403 aa	Known RBP	13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	GALNT5	Q7Z7M9	940 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	FBXL14	Q8N1E6	418 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	NATD1	Q8N6N6	113 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	TOR1AIP2	Q8NFQ8	470 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	GPR119	Q8TDV5	335 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	PROX1	Q92786	737 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	FAM120B	Q96EK7	910 aa	Known RBP	13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CACNG6	Q9BXT2	260 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CXorf36	Q9H7Y0	433 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	EMC3	Q9P0I2	261 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ING1	Q9UK53	422 aa	Predicted RBP	13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CARD8	Q9Y2G2	431 aa		13.92	□□□□□ -0.18
HERPUD1-215	ENST00000568676	DHRS4L1	P0CG22	281 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	SDC1	P18827	310 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ATP12A	P54707	1039 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CBFB	Q13951	182 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	PDK3	Q15120	406 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CCDC153	Q494R4	210 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ZNF385B	Q569K4	471 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CYB5R2	Q6BCY4	276 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	C11orf71	Q6IPW1	123 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ZNF544	Q6NX49	715 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ZNF100	Q8IYN0	542 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	MUC15	Q8N387	334 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	FAM168A	Q92567	244 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CHMP6	Q96FZ7	201 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	C16orf58	Q96GQ5	468 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	KLHDC3	Q9BQ90	382 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ACTRT3	Q9BYD9	372 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	SHARPIN	Q9H0F6	387 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	PRSS50	Q9UI38	385 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	POU2F3	Q9UKI9	436 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	DTNA	Q9Y4J8	743 aa		13.91	□□□□□ -0.18
HERPUD1-215	ENST00000568676	SMAD9	O15198	467 aa	Known RBP	13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	AKAP10	O43572	662 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CHEK2	O96017	543 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	IGHV1-2	P23083	117 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CSNK2A1	P68400	391 aa	Predicted RBP	13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	IRX1	P78414	480 aa	Predicted RBP	13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	LASP1	Q14847	261 aa	Known RBP	13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	DCST2	Q5T1A1	773 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	FBXW9	Q5XUX1	488 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	SLC22A25	Q6T423	547 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	OR56A1	Q8NGH5	318 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	OR5W2	Q8NH69	310 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	OR2W6P	Q8NHA6	318 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	ADAMTS15	Q8TE58	950 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	CDS1	Q92903	461 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	MOAP1	Q96BY2	351 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	TSSK3	Q96PN8	268 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	SERINC1	Q9NRX5	453 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	NPAP1	Q9NZP6	1156 aa		13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	FAF1	Q9UNN5	650 aa	Predicted RBP	13.9	□□□□□ -0.18
HERPUD1-215	ENST00000568676	IGKV3D-15	A0A087WSY6	115 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	IGHV3-15	A0A0B4J1V0	119 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	TMEM114	B3SHH9	223 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ZNF264	O43296	627 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	UBL4A	P11441	157 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	HPCAL1	P37235	193 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CCT5	P48643	541 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	CHRNB3	Q05901	458 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	TOMM34	Q15785	309 aa	Predicted RBP	13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	RFTN2	Q52LD8	501 aa	Predicted RBP	13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	OR7E24	Q6IFN5	339 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	MNS1	Q8NEH6	495 aa		13.89	□□□□□ -0.19
HERPUD1-215	ENST00000568676	ATP6V1C2	Q8NEY4	427 aa		13.89	□□□□□ -0.19

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