RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 BBOF1Q8ND07 529 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 OR52J3Q8NH60 311 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 FBXO30Q8TB52 745 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 PHYHIPQ92561 330 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 EFHD2Q96C19 240 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 CEP19Q96LK0 163 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 ALS2CR12Q96Q35 445 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 MTMR9Q96QG7 549 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 GAL3ST1Q99999 423 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 NDUFAF3Q9BU61 184 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 C8orf33Q9H7E9 229 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 VCPKMTQ9H867 229 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 FANCFQ9NPI8 374 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF256Q9Y2P7 627 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 STRAPQ9Y3F4 350 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 NCAPD2Q15021 1401 aa2.75□□□□□ -1.97
HERPUD1-212ENST00000567944 ANKRD26Q9UPS8 1709 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 ANKRD31Q8N7Z5 1873 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 CD163L1Q9NR16 1453 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 A0A0J9YVX5 310 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 LRIT2A6NDA9 550 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 G3V3Y1 287 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 LIN7AO14910 233 aaPredicted RBP2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 GPAA1O43292 621 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 ZBTB14O43829 449 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 KLHL41O60662 606 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF254O75437 659 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 PALMO75781 387 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 PROS1P07225 676 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF3P17036 446 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 HLA-DPA1P20036 260 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 AKT2P31751 481 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 BPIFB3P59826 476 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 CTAG1AP78358 180 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 NDUFA5Q16718 116 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 CAVIN4Q5BKX8 364 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 FAM159AQ6UWV7 190 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 C2orf66Q6UXQ4 117 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 HACD2Q6Y1H2 254 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 NANOGNBQ7Z5D8 188 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 KRTAP11-1Q8IUC1 163 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 GPR65Q8IYL9 337 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 UBQLNLQ8IYU4 475 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 CCNYQ8ND76 341 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 NEK11Q8NG66 645 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 RFESDQ8TAC1 157 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 ANKRD7Q92527 254 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 NUS1Q96E22 293 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 ARL5BQ96KC2 179 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 CATSPER2Q96P56 530 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 RBM14Q96PK6 669 aaKnown RBP2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 CGREF1Q99674 301 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 CCT7Q99832 543 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 TM2D1Q9BX74 207 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 HCAR1Q9BXC0 346 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 FTHL17Q9BXU8 183 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 DDX47Q9H0S4 455 aaKnown RBP2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 PSTPIP2Q9H939 334 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 FAM114A2Q9NRY5 505 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 HPF1Q9NWY4 346 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 KCNN3Q9UGI6 736 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 CCPG1Q9ULG6 757 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 CLEC4EQ9ULY5 219 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 MTF2Q9Y483 593 aaPredicted RBP2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 ZNF646O15015 1829 aaPredicted RBP2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 TTC28Q96AY4 2481 aa2.74□□□□□ -1.97
HERPUD1-212ENST00000567944 KCPQ6ZWJ8 1503 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 CACNA1SQ13698 1873 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 TTC21AQ8NDW8 1320 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 GOLGA6L7A0A1B0GV03 622 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 RSPH10B2B2RC85 870 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 E7ENQ6 273 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 C11orf98E9PRG8 122 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 SPECC1L-ADORA2AF8WAN1 911 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 GOLGA8SH3BPF8 625 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 SGK1O00141 431 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 LCMT2O60294 686 aaKnown RBP2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 HSF2BPO75031 334 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 CRTAPO75718 401 aaPredicted RBP2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 SNX4O95219 450 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 S100A9P06702 114 aaKnown RBP2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 RSPH10BP0C881 870 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 TOP1P11387 765 aaKnown RBP2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 HMGB2P26583 209 aaKnown RBP2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 PRDX6P30041 224 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 NT5C2P49902 561 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 ETV1P50549 477 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 GPC3P51654 580 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 HSD17B7P56937 341 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 MAP3K7CLP57077 242 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 LYZP61626 148 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 BNIP1Q12981 228 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 ASAH1Q13510 395 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 KIAA0040Q15053 153 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 TSC22D1Q15714 1073 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 STK11Q15831 433 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 QRICH1Q2TAL8 776 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 CFAP221Q4G0U5 840 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 CFAP157Q5JU67 520 aa2.73□□□□□ -1.97
HERPUD1-212ENST00000567944 SLC22A10Q63ZE4 541 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms