RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 NPIPA7E9PJI5 369 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 CFLARO15519 480 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 FESP07332 822 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 CD3EP07766 207 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 NPIPA8P0DM63 369 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 MATN1P21941 496 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 CLDN8P56748 225 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 HBA1P69905 142 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 PPP2R2BQ00005 443 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 EMX2Q04743 252 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 CBFBQ13951 182 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 TAB1Q15750 504 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 TOMM34Q15785 309 aaPredicted RBP13.32□□□□□ -0.28
RNF40-209ENST00000566703 ZNF141Q15928 474 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 AP1ARQ63HQ0 302 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 LILRB1Q8NHL6 650 aaPredicted RBP13.32□□□□□ -0.28
RNF40-209ENST00000566703 PIWIL2Q8TC59 973 aaKnown RBP13.32□□□□□ -0.28
RNF40-209ENST00000566703 TCP10LQ8TDR4 215 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 OIT3Q8WWZ8 545 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 KISS1RQ969F8 398 aaPredicted RBP13.32□□□□□ -0.28
RNF40-209ENST00000566703 TUBGCP3Q96CW5 907 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 DUSP26Q9BV47 211 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 LAT2Q9GZY6 243 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 COQ10BQ9H8M1 238 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 GIMAP2Q9UG22 337 aa13.32□□□□□ -0.28
RNF40-209ENST00000566703 SERINC4A6NH21 518 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 ZNF724A8MTY0 619 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 ESPNB1AK53 854 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 CYTIPO60759 359 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 STX11O75558 287 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 ADAP00813 363 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 GUSBP08236 651 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 UBL4AP11441 157 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 ENPP1P22413 925 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 PCSK6P29122 969 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 SLC7A1P30825 629 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 OR3A2P47893 321 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 CAPRIN1Q14444 709 aaKnown RBP13.31□□□□□ -0.28
RNF40-209ENST00000566703 QPRTQ15274 297 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 ZCCHC23Q6ZST2 131 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 Q6ZT83 130 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 C6orf120Q7Z4R8 191 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 KRTCAP2Q8N6L1 136 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 ZNF614Q8N883 585 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 ATP6V1C2Q8NEY4 427 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 OR2W6PQ8NHA6 318 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 RAB3IL1Q8TBN0 382 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 AGR3Q8TD06 166 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 TMEM234Q8WY98 164 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 ST8SIA1Q92185 356 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 FBXW5Q969U6 566 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 PSD2Q9BQI7 771 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 C1orf50Q9BV19 199 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 POTEKPQ9BYX7 375 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 GRIP2Q9C0E4 1043 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 ANKZF1Q9H8Y5 726 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 SERINC1Q9NRX5 453 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 ASIC5Q9NY37 505 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 ING1Q9UK53 422 aaPredicted RBP13.31□□□□□ -0.28
RNF40-209ENST00000566703 LAMP3Q9UQV4 416 aa13.31□□□□□ -0.28
RNF40-209ENST00000566703 NIPBLQ6KC79 2804 aaeCLIP13.31□□□□□ -0.28
RNF40-209ENST00000566703 HEATR5AQ86XA9 2040 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 ZNF814B7Z6K7 855 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 AGR2O95994 175 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 BPGMP07738 259 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 DANCRP0C864 163 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 G6PDP11413 515 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 FKBP2P26885 142 aaKnown RBP13.3□□□□□ -0.28
RNF40-209ENST00000566703 ARRB2P32121 409 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 IDUAP35475 653 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 RASGEF1BQ0VAM2 473 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 TNK1Q13470 666 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 PDK3Q15120 406 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 ARHGAP11BQ3KRB8 267 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 C3orf33Q6P1S2 294 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 BHLHA15Q7RTS1 189 aaPredicted RBP13.3□□□□□ -0.28
RNF40-209ENST00000566703 P2RY8Q86VZ1 359 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 PRIMA1Q86XR5 153 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 MIPOL1Q8TD10 442 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 SMAP2Q8WU79 429 aaPredicted RBP13.3□□□□□ -0.28
RNF40-209ENST00000566703 ZNF524Q96C55 264 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 EXD2Q9NVH0 621 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 NOP53Q9NZM5 478 aaKnown RBP13.3□□□□□ -0.28
RNF40-209ENST00000566703 PCDHGB4Q9UN71 923 aa13.3□□□□□ -0.28
RNF40-209ENST00000566703 MAP1AP78559 2803 aaPredicted RBP13.29□□□□□ -0.28
RNF40-209ENST00000566703 A0A1W2PNR3 127 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 RNASET2O00584 256 aaKnown RBP13.29□□□□□ -0.28
RNF40-209ENST00000566703 SPAG7O75391 227 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 PGCP20142 388 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 SESN3P58005 492 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 CSNK2A1P68400 391 aaPredicted RBP13.29□□□□□ -0.28
RNF40-209ENST00000566703 IFFO1Q0D2I5 559 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 TSC22D1Q15714 1073 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 NDUFAF6Q330K2 333 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 ZNF672Q499Z4 452 aaPredicted RBP13.29□□□□□ -0.28
RNF40-209ENST00000566703 TIGD2Q4W5G0 525 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 PDZK1Q5T2W1 519 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 HEPHL1Q6MZM0 1159 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 TMPPEQ6ZT21 453 aa13.29□□□□□ -0.28
RNF40-209ENST00000566703 OR8J2Q8NGG1 315 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms