RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 FNDC5Q8NAU1 212 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 B3GNT7Q8NFL0 401 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 OR7G2Q8NG99 324 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 OR9Q2Q8NGE9 314 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 OR51L1Q8NGJ5 315 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 OR9G4Q8NGQ1 327 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 OR13C9Q8NGT0 318 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ACMSDQ8TDX5 336 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 TBCKQ8TEA7 893 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 PAQR8Q8TEZ7 354 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 PIH1D2Q8WWB5 315 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ARNTL2Q8WYA1 636 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 BADQ92934 168 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 DLX4Q92988 240 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 TOP1MTQ969P6 601 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ADGRG7Q96K78 797 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 LURAP1Q96LR2 239 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF354BQ96LW1 612 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 FAM210AQ96ND0 272 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 TRNT1Q96Q11 434 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 MBOAT4Q96T53 435 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 SLC30A2Q9BRI3 323 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 LZTS2Q9BRK4 669 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 TUBGCP2Q9BSJ2 902 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 PAPOLGQ9BWT3 736 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ILKAPQ9H0C8 392 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 SLITRK2Q9H156 845 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 PPA2Q9H2U2 334 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ANKRD19PQ9H560 264 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 FNDC4Q9H6D8 234 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 PARVGQ9HBI0 331 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ZBTB20Q9HC78 741 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ADAP2Q9NPF8 381 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 NUDT15Q9NV35 164 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 INTS9Q9NV88 658 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 IFNKQ9P0W0 207 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 MYEF2Q9P2K5 600 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 MBD2Q9UBB5 411 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 CYTH4Q9UIA0 394 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 GGA2Q9UJY4 613 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ZNF221Q9UK13 617 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 TCF19Q9Y242 345 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 RBMX2Q9Y388 322 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 AK6Q9Y3D8 172 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 PEX16Q9Y5Y5 336 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 ARID2Q68CP9 1835 aa2.88□□□□□ -1.95
HERPUD1-211ENST00000566550 GOLGA8QA0A0J9YX86 632 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 TRBV11-1A0A0K0K1C0 115 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 A0A1W2PNV4 684 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 A0A1W2PPE3 182 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 F5H6K3 240 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 H3BMQ9 156 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 NR5A2O00482 541 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 AIM2O14862 343 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 KDELR3O43731 214 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 AIREO43918 545 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 PDE5AO76074 875 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 TOXO94900 526 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 SCELO95171 688 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 SEC24AO95486 1093 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 TMEM50AO95807 157 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 NGFP01138 241 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 JCHAINP01591 159 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 MMP1P03956 469 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 HBQ1P09105 142 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 FGF5P12034 268 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 AOC1P19801 751 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 OTX1P32242 354 aaPredicted RBP2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 SAA4P35542 130 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 SOX3P41225 446 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 HERV-K104P61576 105 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 RPS27AP62979 156 aaKnown RBP2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 KLRC3Q07444 240 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 Q0VFX4 171 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 KLRB1Q12918 225 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 SNTA1Q13424 505 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 RCAN2Q14206 197 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 TMEM187Q14656 261 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 FASTKD3Q14CZ7 662 aaKnown RBP2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 EMC2Q15006 297 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 GTDC1Q4AE62 458 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 SPECC1LQ69YQ0 1117 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 OR8G2PQ6IF36 304 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 PRR5LQ6MZQ0 368 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 SASS6Q6UVJ0 657 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 C6orf89Q6UWU4 347 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 ASCL5Q7RTU5 278 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 SLC16A14Q7RTX9 510 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 SCD5Q86SK9 330 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 KCNMB4Q86W47 210 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 TRIM69Q86WT6 500 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 MARCH9Q86YJ5 346 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 OR4N5Q8IXE1 308 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 OR2T33Q8NG76 320 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 OR10A7Q8NGE5 316 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 OR4D9Q8NGE8 314 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 OR52I1Q8NGK6 324 aa2.87□□□□□ -1.95
HERPUD1-211ENST00000566550 OR4A4PQ8NGN8 299 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms