RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 ZNF607Q96SK3 696 aa3.21□□□□□ -1.9
CHD9-215ENST00000565442 MCHR1Q99705 422 aa3.21□□□□□ -1.9
CHD9-215ENST00000565442 EDEM2Q9BV94 578 aa3.21□□□□□ -1.9
CHD9-215ENST00000565442 YTHDF1Q9BYJ9 559 aaKnown RBP3.21□□□□□ -1.9
CHD9-215ENST00000565442 TUBAL3A6NHL2 446 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 EPOPA6NHQ4 379 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 SULT2B1O00204 365 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 GMFGO60234 142 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 IGHV3-23P01764 117 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 HSPB1P04792 205 aaKnown RBP3.2□□□□□ -1.9
CHD9-215ENST00000565442 IGLL1P15814 213 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 PSMB1P20618 241 aaKnown RBP3.2□□□□□ -1.9
CHD9-215ENST00000565442 AP3M2P53677 418 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 OC90Q02509 493 aaPredicted RBP3.2□□□□□ -1.9
CHD9-215ENST00000565442 CSTF1Q05048 431 aaKnown RBP3.2□□□□□ -1.9
CHD9-215ENST00000565442 AANATQ16613 207 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 C10orf120Q5SQS8 335 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 METTL11BQ5VVY1 283 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 LIPNQ5VXI9 398 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 TTC23Q5W5X9 447 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 ZNF544Q6NX49 715 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 FAM71F2Q6NXP2 309 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 KIR3DL3Q8N743 410 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 OR2T3Q8NH03 318 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 ZNF564Q8TBZ8 553 aaPredicted RBP3.2□□□□□ -1.9
CHD9-215ENST00000565442 TRIM44Q96DX7 344 aaPredicted RBP3.2□□□□□ -1.9
CHD9-215ENST00000565442 AMDHD1Q96NU7 426 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 IL4I1Q96RQ9 567 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 OMDQ99983 421 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 CNPY3Q9BT09 278 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 SPATA16Q9BXB7 569 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 NMUR2Q9GZQ4 415 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 PTGES2Q9H7Z7 377 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 NANSQ9NR45 359 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 SLC17A5Q9NRA2 495 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 AIPL1Q9NZN9 384 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 RNF14Q9UBS8 474 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 LCMT1Q9UIC8 334 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 UBQLN1Q9UMX0 589 aaKnown RBP3.2□□□□□ -1.9
CHD9-215ENST00000565442 MRPS33Q9Y291 106 aaKnown RBP3.2□□□□□ -1.9
CHD9-215ENST00000565442 LRRK1Q38SD2 2015 aa3.2□□□□□ -1.9
CHD9-215ENST00000565442 KIF16BQ96L93 1317 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 ZNF318Q5VUA4 2279 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 ADAMTS9Q9P2N4 1935 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 IGHV2-70DA0A0C4DH43 119 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 NPIPA7E9PJI5 369 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 CPLX1O14810 134 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 TPST2O60704 377 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 TBL1XO60907 577 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 LYPLA1O75608 230 aaPredicted RBP3.19□□□□□ -1.9
CHD9-215ENST00000565442 H2BFMP0C1H6 154 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 NPIPA8P0DM63 369 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 CYP2B6P20813 491 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 HNF1AP20823 631 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 HOXD10P28358 340 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 CD80P33681 288 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 KIR2DS2P43631 304 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 SLC26A2P50443 739 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 PPT1P50897 306 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 HSPA2P54652 639 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 STX17P56962 302 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 SLC10A7Q0GE19 358 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 KYAT1Q16773 422 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 LRRC36Q1X8D7 754 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 ANKDD1AQ495B1 522 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 TP53I3Q53FA7 332 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 ATL3Q6DD88 541 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 TFAP2EQ6VUC0 442 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 TPRA1Q86W33 373 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 OR10A7Q8NGE5 316 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 PAQR8Q8TEZ7 354 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 NEIL2Q969S2 332 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 FGGYQ96C11 551 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 FAM122AQ96E09 287 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 PELI1Q96FA3 418 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 SH3YL1Q96HL8 342 aaPredicted RBP3.19□□□□□ -1.9
CHD9-215ENST00000565442 ZNF184Q99676 751 aaPredicted RBP3.19□□□□□ -1.9
CHD9-215ENST00000565442 RAB18Q9NP72 206 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 PLSCR3Q9NRY6 295 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 SIGLEC8Q9NYZ4 499 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 IL17CQ9P0M4 197 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 TMEM9Q9P0T7 183 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 ONECUT1Q9UBC0 465 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 NPIPA1Q9UND3 350 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 ABCG2Q9UNQ0 655 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 PLLPQ9Y342 182 aa3.19□□□□□ -1.9
CHD9-215ENST00000565442 A0A1W2PNV4 684 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 MBLAC1A4D2B0 266 aaPredicted RBP3.18□□□□□ -1.9
CHD9-215ENST00000565442 VSTM2BA6NLU5 285 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 BTN3A3O00478 584 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 RS1O15537 224 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 PRKYO43930 277 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 UGT2B17O75795 530 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 GNA14O95837 355 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 GCFC2P16383 781 aaKnown RBP3.18□□□□□ -1.9
CHD9-215ENST00000565442 OTX2P32243 289 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 RGRP47804 291 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 PRKXP51817 358 aa3.18□□□□□ -1.9
CHD9-215ENST00000565442 CCDC152Q4G0S7 254 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms