RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 DDCP20711 480 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 MSX1P28360 303 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 RAB28P51157 221 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 PIGFQ07326 219 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 PCBP2Q15366 365 aaKnown RBP eCLIP4.8□□□□□ -1.641e-7■■■■□ 25.7
SMG1-211ENST00000565324 NDUFAF7Q7L592 441 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 REM2Q8IYK8 340 aaPredicted RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 FAM160A2Q8N612 972 aaPredicted RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 OR51L1Q8NGJ5 315 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 CMTM2Q8TAZ6 248 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 TFAP2BQ92481 460 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ZNF689Q96CS4 500 aaPredicted RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 NKX3-1Q99801 234 aaPredicted RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 PCED1AQ9H1Q7 454 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ARV1Q9H2C2 271 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ANKRD19PQ9H560 264 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 SYNPO2LQ9H987 977 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 CDH20Q9HBT6 801 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 PRDM9Q9NQV7 894 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 SIDT1Q9NXL6 827 aaKnown RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 GAR1Q9NY12 217 aaKnown RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 KPTNQ9Y664 436 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 MON2Q7Z3U7 1717 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ZFC3H1O60293 1989 aaKnown RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 RIMS1Q86UR5 1692 aaKnown RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 TMEM200CA6NKL6 621 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 TMEM212A6NML5 194 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ANHXE9PGG2 379 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ACP2P11117 423 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 PSMB1P20618 241 aaKnown RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 AGTR2P50052 363 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 HCCSP53701 268 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 LTBQ06643 244 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ACSM1Q08AH1 577 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 NFATC2Q13469 925 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ADIRFQ15847 76 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 FAM182AQ5T1J6 154 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 RNLSQ5VYX0 342 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 TMEM107Q6UX40 140 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 SERPINA11Q86U17 422 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 GLB1L2Q8IW92 636 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 SLC39A13Q96H72 371 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 GPR20Q99678 358 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 PDE7BQ9NP56 450 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 FBXL12Q9NXK8 326 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 HHLA2Q9UM44 414 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 TUBAL3A6NHL2 446 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 B4DGG1 531 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 GBAP04062 536 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 PDGFAP04085 211 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 SLC2A1P11166 492 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 SOX3P41225 446 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 RPS21P63220 83 aaKnown RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 KIAA0141Q14154 515 aaPredicted RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 GLYR1Q49A26 553 aaPredicted RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 C9orf131Q5VYM1 1079 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ENPP6Q6UWR7 440 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 OR1S2Q8NGQ3 325 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 OR4K13Q8NH42 304 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ESAMQ96AP7 390 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 KAZALD1Q96I82 304 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 OR1F2PQ96R84 312 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 GAS2L1Q99501 681 aaPredicted RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 BCO2Q9BYV7 579 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 EHFQ9NZC4 300 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 DUSP11O75319 330 aaKnown RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 SUMO1P63165 101 aaKnown RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 ENDOGQ14249 297 aaKnown RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 UGCGQ16739 394 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 CYP27C1Q4G0S4 372 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 NKAIN3Q8N8D7 197 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 DCAF4L2Q8NA75 395 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 LRFN5Q96NI6 719 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ZNF160Q9HCG1 818 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 SEMA4GQ9NTN9 838 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ICE1Q9Y2F5 2266 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 COL5A2P05997 1499 aaPredicted RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 TRBV23OR9-2A0A075B6M9 112 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 RNASET2O00584 256 aaKnown RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 GSRP00390 522 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 MT-ND4P03905 459 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 WDR5P61964 334 aaKnown RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 CHRNEQ04844 493 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 GRM2Q14416 872 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ZNF805Q5CZA5 627 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 NCBP2-AS2Q69YL0 99 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 LCN10Q6JVE6 187 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 OGFOD3Q6PK18 319 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 CLEC20AQ6ZU45 233 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 OR10Z1Q8NGY1 313 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 KCNG3Q8TAE7 436 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 CERKQ8TCT0 537 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 RPL10LQ96L21 214 aaKnown RBP4.8□□□□□ -1.64
SMG1-211ENST00000565324 ZNF597Q96LX8 424 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ZDHHC7Q9NXF8 308 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 PLIN4Q96Q06 1357 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ADH4P08319 380 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 HBQ1P09105 142 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 TAS2R38P59533 333 aa4.8□□□□□ -1.64
SMG1-211ENST00000565324 ERVFC1P60507 584 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms