RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 ULK2Q8IYT8 1036 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 UBQLNLQ8IYU4 475 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 C10orf111Q8N326 155 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 FBXO27Q8NI29 283 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 ZPLD1Q8TCW7 415 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 SSC4DQ8WTU2 575 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 SMPDL3BQ92485 455 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 CNOT9Q92600 299 aaKnown RBP14.45□□□□□ -0.1
RAB40C-208ENST00000564703 RND1Q92730 232 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 MRGPRX4Q96LA9 322 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 PRDM14Q9GZV8 571 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 KLHL28Q9NXS3 571 aa14.45□□□□□ -0.1
RAB40C-208ENST00000564703 ZNF443Q9Y2A4 671 aaPredicted RBP14.45□□□□□ -0.1
RAB40C-208ENST00000564703 HEATR5AQ86XA9 2040 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 HELZ2Q9BYK8 2649 aaKnown RBP14.44□□□□□ -0.1
RAB40C-208ENST00000564703 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 CDHR4A6H8M9 788 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 CFAP73A6NFT4 308 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 GJE1A6NN92 205 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 M0QX08 132 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 FXYD1O00168 92 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 IFNA14P01570 189 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 IDH2P48735 452 aaKnown RBP14.44□□□□□ -0.1
RAB40C-208ENST00000564703 LHX2P50458 406 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 RPS3AP61247 264 aaKnown RBP14.44□□□□□ -0.1
RAB40C-208ENST00000564703 RAC1P63000 192 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 MXRA7P84157 204 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 PMPCAQ10713 525 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 SGCBQ16585 318 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 ZNF836Q6ZNA1 936 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 NET1Q7Z628 596 aaPredicted RBP14.44□□□□□ -0.1
RAB40C-208ENST00000564703 PATL1Q86TB9 770 aaKnown RBP14.44□□□□□ -0.1
RAB40C-208ENST00000564703 PTOV1Q86YD1 416 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 ARMC8Q8IUR7 673 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 GRAMD2AQ8IUY3 354 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 ZZZ3Q8IYH5 903 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 PHF10Q8WUB8 498 aaKnown RBP14.44□□□□□ -0.1
RAB40C-208ENST00000564703 ST8SIA1Q92185 356 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 RNF145Q96MT1 663 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 ACER3Q9NUN7 267 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 RLIMQ9NVW2 624 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 COQ3Q9NZJ6 369 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 MED12Q93074 2177 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 HIVEP3Q5T1R4 2406 aa14.44□□□□□ -0.1
RAB40C-208ENST00000564703 SHISA8B8ZZ34 492 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 SEC14L5O43304 696 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 DNAJA2O60884 412 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 EPPINO95925 133 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 ZNF708P17019 499 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 PRKCAP17252 672 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 PRKAR1BP31321 381 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 PCGF2P35227 344 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 SESN3P58005 492 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 EEF1A1P68104 462 aaKnown RBP14.43□□□□□ -0.1
RAB40C-208ENST00000564703 MERTKQ12866 999 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 FOXF1Q12946 379 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 TOMM34Q15785 309 aaPredicted RBP14.43□□□□□ -0.1
RAB40C-208ENST00000564703 TMEM44Q2T9K0 475 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 DCST1Q5T197 706 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 RNF220Q5VTB9 566 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 XKRXQ6PP77 449 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 RPTNQ6XPR3 784 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 SLC15A3Q8IY34 581 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 LILRA2Q8N149 483 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 CLIP4Q8N3C7 705 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 FAM71CQ8NEG0 241 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 ATP6V1C2Q8NEY4 427 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 OR2T12Q8NG77 320 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 CCDC120Q96HB5 630 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 REXO5Q96IC2 774 aaKnown RBP14.43□□□□□ -0.1
RAB40C-208ENST00000564703 ZNF583Q96ND8 569 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 TRIB1Q96RU8 372 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 TTYH2Q9BSA4 534 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 CALHM2Q9HA72 323 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 NDE1Q9NXR1 346 aa14.43□□□□□ -0.1
RAB40C-208ENST00000564703 DNAJB12Q9NXW2 375 aaKnown RBP14.43□□□□□ -0.1
RAB40C-208ENST00000564703 GSTA4O15217 222 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 ZG16O60844 167 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 LDLRP01130 860 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 IL2RAP01589 272 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 ELK4P28324 431 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 APOBEC1P41238 236 aaKnown RBP14.42□□□□□ -0.1
RAB40C-208ENST00000564703 HTR3AP46098 478 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 CPA2P48052 419 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 GZMMP51124 257 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 CLDN18P56856 261 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 PSME3P61289 254 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 SRSF1Q07955 248 aaKnown RBP eCLIP14.42□□□□□ -0.1
RAB40C-208ENST00000564703 VEZF1Q14119 521 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 KRT72Q14CN4 511 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 SLC25A53Q5H9E4 307 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 FAM91A1Q658Y4 838 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 MRGPRGQ86SM5 289 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 CALHM3Q86XJ0 350 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 LACC1Q8IV20 430 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 FITM2Q8N6M3 262 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 POC1BQ8TC44 478 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 RASSF5Q8WWW0 418 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 NSL1Q96IY1 281 aa14.42□□□□□ -0.1
RAB40C-208ENST00000564703 DMRTA2Q96SC8 542 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms