RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 SHC1P29353 583 aa27.59■■■□□ 2.01
CMTM4-204ENST00000563952 SLC6A8P48029 635 aa27.59■■■□□ 2.01
CMTM4-204ENST00000563952 TXNL4AP83876 142 aaKnown RBP27.59■■■□□ 2.01
CMTM4-204ENST00000563952 FGFBP1Q14512 234 aa27.59■■■□□ 2.01
CMTM4-204ENST00000563952 C6orf10Q5SRN2 563 aa27.59■■■□□ 2.01
CMTM4-204ENST00000563952 PDSS1Q5T2R2 415 aa27.59■■■□□ 2.01
CMTM4-204ENST00000563952 MSANTD1Q6ZTZ1 278 aa27.59■■■□□ 2.01
CMTM4-204ENST00000563952 ZFP90Q8TF47 636 aa27.59■■■□□ 2.01
CMTM4-204ENST00000563952 ZG16BQ96DA0 208 aa27.59■■■□□ 2.01
CMTM4-204ENST00000563952 STARD4Q96DR4 205 aa27.59■■■□□ 2.01
CMTM4-204ENST00000563952 MAGEB18Q96M61 343 aa27.59■■■□□ 2.01
CMTM4-204ENST00000563952 CCDC28BQ9BUN5 200 aa27.59■■■□□ 2.01
CMTM4-204ENST00000563952 QRSL1Q9H0R6 528 aaKnown RBP27.59■■■□□ 2.01
CMTM4-204ENST00000563952 PAQR5Q9NXK6 330 aaPredicted RBP27.59■■■□□ 2.01
CMTM4-204ENST00000563952 MCTS1Q9ULC4 181 aaKnown RBP27.59■■■□□ 2.01
CMTM4-204ENST00000563952 LIPT1Q9Y234 373 aa27.59■■■□□ 2.01
CMTM4-204ENST00000563952 HEATR5AQ86XA9 2040 aa27.58■■■□□ 2.01
CMTM4-204ENST00000563952 TUBAL3A6NHL2 446 aa27.58■■■□□ 2.01
CMTM4-204ENST00000563952 EFNA2O43921 213 aa27.58■■■□□ 2.01
CMTM4-204ENST00000563952 CPOXP36551 454 aa27.58■■■□□ 2.01
CMTM4-204ENST00000563952 KIR2DL2P43627 348 aaPredicted RBP27.58■■■□□ 2.01
CMTM4-204ENST00000563952 GTDC1Q4AE62 458 aa27.58■■■□□ 2.01
CMTM4-204ENST00000563952 BTLAQ7Z6A9 289 aa27.58■■■□□ 2.01
CMTM4-204ENST00000563952 MRGPRX4Q96LA9 322 aa27.58■■■□□ 2.01
CMTM4-204ENST00000563952 TRNT1Q96Q11 434 aaKnown RBP27.58■■■□□ 2.01
CMTM4-204ENST00000563952 CREBBPQ92793 2442 aa27.57■■■□□ 2
CMTM4-204ENST00000563952 A8MXE2 369 aa27.57■■■□□ 2
CMTM4-204ENST00000563952 CHRM4P08173 479 aa27.57■■■□□ 2
CMTM4-204ENST00000563952 NR2F1P10589 423 aa27.57■■■□□ 2
CMTM4-204ENST00000563952 CAPN3P20807 821 aa27.57■■■□□ 2
CMTM4-204ENST00000563952 LINC01560Q8TB33 94 aa27.57■■■□□ 2
CMTM4-204ENST00000563952 FAM222BQ8WU58 562 aa27.57■■■□□ 2
CMTM4-204ENST00000563952 OIT3Q8WWZ8 545 aa27.57■■■□□ 2
CMTM4-204ENST00000563952 OSTF1Q92882 214 aa27.57■■■□□ 2
CMTM4-204ENST00000563952 SLC35A3Q9Y2D2 325 aa27.57■■■□□ 2
CMTM4-204ENST00000563952 MSTNO14793 375 aa27.56■■■□□ 2
CMTM4-204ENST00000563952 BCAS1O75363 584 aaPredicted RBP27.56■■■□□ 2
CMTM4-204ENST00000563952 PLGP00747 810 aaPredicted RBP27.56■■■□□ 2
CMTM4-204ENST00000563952 ZCCHC18P0CG32 403 aa27.56■■■□□ 2
CMTM4-204ENST00000563952 PGM1P36871 562 aa27.56■■■□□ 2
CMTM4-204ENST00000563952 CRATP43155 626 aa27.56■■■□□ 2
CMTM4-204ENST00000563952 CARD18P57730 90 aa27.56■■■□□ 2
CMTM4-204ENST00000563952 SORDQ00796 357 aa27.56■■■□□ 2
CMTM4-204ENST00000563952 TMEM176BQ3YBM2 270 aaPredicted RBP27.56■■■□□ 2
CMTM4-204ENST00000563952 SLC2A7Q6PXP3 512 aa27.56■■■□□ 2
CMTM4-204ENST00000563952 THOC1Q96FV9 657 aaKnown RBP27.56■■■□□ 2
CMTM4-204ENST00000563952 AURKBQ96GD4 344 aaPredicted RBP27.56■■■□□ 2
CMTM4-204ENST00000563952 OPN3Q9H1Y3 402 aaPredicted RBP27.56■■■□□ 2
CMTM4-204ENST00000563952 SLC38A1Q9H2H9 487 aa27.56■■■□□ 2
CMTM4-204ENST00000563952 TPT1P8Q9HAU6 139 aa27.56■■■□□ 2
CMTM4-204ENST00000563952 ST6GALNAC1Q9NSC7 600 aaPredicted RBP27.56■■■□□ 2
CMTM4-204ENST00000563952 CLEC4AQ9UMR7 237 aa27.56■■■□□ 2
CMTM4-204ENST00000563952 GJE1A6NN92 205 aa27.55■■■□□ 2
CMTM4-204ENST00000563952 NTN1O95631 604 aa27.55■■■□□ 2
CMTM4-204ENST00000563952 PGCP20142 388 aa27.55■■■□□ 2
CMTM4-204ENST00000563952 AP1ARQ63HQ0 302 aa27.55■■■□□ 2
CMTM4-204ENST00000563952 LRRC74BQ6ZQY2 392 aa27.55■■■□□ 2
CMTM4-204ENST00000563952 PDZD2O15018 2839 aa27.54■■■□□ 2
CMTM4-204ENST00000563952 UQCRHLA0A096LP55 91 aa27.54■■■□□ 2
CMTM4-204ENST00000563952 CLDN24A6NM45 220 aa27.54■■■□□ 2
CMTM4-204ENST00000563952 ETFAP13804 333 aa27.54■■■□□ 2
CMTM4-204ENST00000563952 MRPL19P49406 292 aaKnown RBP27.54■■■□□ 2
CMTM4-204ENST00000563952 MVDP53602 400 aa27.54■■■□□ 2
CMTM4-204ENST00000563952 KCNJ10P78508 379 aa27.54■■■□□ 2
CMTM4-204ENST00000563952 SELENBP1Q13228 472 aa27.54■■■□□ 2
CMTM4-204ENST00000563952 SLC25A53Q5H9E4 307 aa27.54■■■□□ 2
CMTM4-204ENST00000563952 FAM71CQ8NEG0 241 aa27.54■■■□□ 2
CMTM4-204ENST00000563952 GTF2H4Q92759 462 aa27.54■■■□□ 2
CMTM4-204ENST00000563952 NR5A2O00482 541 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 DNAJA2O60884 412 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 RYKP34925 604 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 SESN3P58005 492 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 GUSBP1Q15486 140 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 FAM214BQ7L5A3 538 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 TMEM234Q8WY98 164 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 ROBO4Q8WZ75 1007 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 ST8SIA1Q92185 356 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 GPATCH1Q9BRR8 931 aaKnown RBP27.53■■■□□ 2
CMTM4-204ENST00000563952 TIGARQ9NQ88 270 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 CCDC167Q9P0B6 97 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 P2RX2Q9UBL9 471 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 PROCRQ9UNN8 238 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 EMC9Q9Y3B6 208 aa27.53■■■□□ 2
CMTM4-204ENST00000563952 TACC2O95359 2948 aa27.52■■■□□ 2
CMTM4-204ENST00000563952 AGAP5A6NIR3 686 aa27.52■■■□□ 2
CMTM4-204ENST00000563952 CTAG2O75638 210 aa27.52■■■□□ 2
CMTM4-204ENST00000563952 MAGEA8P43361 318 aa27.52■■■□□ 2
CMTM4-204ENST00000563952 CTBP2P56545 445 aa27.52■■■□□ 2
CMTM4-204ENST00000563952 DSTNP60981 165 aa27.52■■■□□ 2
CMTM4-204ENST00000563952 CDH24Q86UP0 819 aa27.52■■■□□ 2
CMTM4-204ENST00000563952 FUNDC1Q8IVP5 155 aa27.52■■■□□ 2
CMTM4-204ENST00000563952 ARFGAP2Q8N6H7 521 aa27.52■■■□□ 2
CMTM4-204ENST00000563952 ZNF563Q8TA94 476 aa27.52■■■□□ 2
CMTM4-204ENST00000563952 REXO5Q96IC2 774 aaKnown RBP27.52■■■□□ 2
CMTM4-204ENST00000563952 GMPPAQ96IJ6 420 aaPredicted RBP27.52■■■□□ 2
CMTM4-204ENST00000563952 SRXN1Q9BYN0 137 aa27.52■■■□□ 2
CMTM4-204ENST00000563952 PAIP1Q9H074 479 aaKnown RBP27.52■■■□□ 2
CMTM4-204ENST00000563952 MTHFD2LQ9H903 347 aaPredicted RBP27.52■■■□□ 2
CMTM4-204ENST00000563952 DNAJB12Q9NXW2 375 aaKnown RBP27.52■■■□□ 2
CMTM4-204ENST00000563952 PCDHB14Q9Y5E9 798 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms