RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 MPC1LP0DKB6 136 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 OGNP20774 298 aaKnown RBP8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 NT5EP21589 574 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 CPN2P22792 545 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 HPDP32754 393 aaPredicted RBP8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 TGFBR2P37173 567 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 IER3P46695 156 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 EVX1P49640 407 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 NAP1L1P55209 391 aaKnown RBP8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 PRPS1P60891 318 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 NAAAQ02083 359 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 HGFACQ04756 655 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 CUL1Q13616 776 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 MMEL1Q495T6 779 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 CLEC6AQ6EIG7 209 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 DUX4L9Q6RFH8 374 aaPredicted RBP8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 SBSPONQ8IVN8 264 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 C1orf162Q8NEQ5 155 aaPredicted RBP8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 CD200R1Q8TD46 325 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 SLC5A11Q8WWX8 675 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 LRTOMTQ8WZ04 291 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 CALR3Q96L12 384 aaKnown RBP8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 IL22Q9GZX6 179 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 ZNF385DQ9H6B1 395 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 RPF2Q9H7B2 306 aaKnown RBP8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 PELI2Q9HAT8 420 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 TIGARQ9NQ88 270 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 SLC7A10Q9NS82 523 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 ASB6Q9NWX5 421 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 DUX4Q9UBX2 424 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 ABCG2Q9UNQ0 655 aa8.91□□□□□ -0.98
HDGFL3-204ENST00000563790 TCRBV7S3A2A0A539 114 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 MIF4GDA9UHW6 222 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 TO15178 435 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 GAS8O95995 478 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 IGHV3-9P01782 118 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 CT62P0C5K7 136 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 CALCRP30988 508 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 FOXG1P55316 489 aaPredicted RBP8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 HFEQ30201 348 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 GRAMD1BQ3KR37 738 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 IKBIPQ70UQ0 350 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 TMEM139Q8IV31 216 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 UBE2J2Q8N2K1 259 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 AGGF1Q8N302 714 aaeCLIP8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 TTLQ8NG68 377 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 OR7G1Q8NGA0 311 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 C1orf54Q8WWF1 131 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 ZNF75CPQ92670 426 aaPredicted RBP8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 TMBIM1Q969X1 311 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 ITPAQ9BY32 194 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 MRPL15Q9P015 296 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 ZMAT5Q9UDW3 170 aaKnown RBP8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 MALT1Q9UDY8 824 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 SIGLEC9Q9Y336 463 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 CAPN6Q9Y6Q1 641 aa8.9□□□□□ -0.98
HDGFL3-204ENST00000563790 ZCWPW2A0A1B0GU75 182 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 ZNF724A8MTY0 619 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 CLDN25C9JDP6 229 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 H0YHG0 523 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 TNFRSF13BO14836 293 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 CDC14BO60729 498 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 GPR75O95800 540 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 CD22P20273 847 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 PSMA4P25789 261 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 CETN2P41208 172 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 EFR3AQ14156 821 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 SPA17Q15506 151 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 MRNIPQ6NTE8 343 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 PEX26Q7Z412 305 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 GALNT5Q7Z7M9 940 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 LDLRAD3Q86YD5 345 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 DENND6AQ8IWF6 608 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 GTPBP8Q8N3Z3 284 aaPredicted RBP8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 OR56A3Q8NH54 315 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 CCT6BQ92526 530 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 TIMD4Q96H15 378 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 KLHL15Q96M94 604 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 KCNC2Q96PR1 638 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 ADOQ96SZ5 270 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 ZMAT4Q9H898 229 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 LYARQ9NX58 379 aaKnown RBP8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 PAK5Q9P286 719 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 DHRS7Q9Y394 339 aa8.89□□□□□ -0.99
HDGFL3-204ENST00000563790 A8MXK9 166 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 C9JVG2 144 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 E7EVH7 732 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 PDLIM1O00151 329 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 TSPAN2O60636 221 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 SLC35E2BP0CK96 405 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 GSTM2P28161 218 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 MAGEA6P43360 314 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 RNF144AP50876 292 aaPredicted RBP8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 MANFP55145 182 aaKnown RBP8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 DGCR2P98153 550 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 TEKQ02763 1124 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 ZNF771Q7L3S4 317 aaPredicted RBP8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 CPNE9Q8IYJ1 553 aa8.88□□□□□ -0.99
HDGFL3-204ENST00000563790 UBL4BQ8N7F7 174 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms