RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 CDC42EP5Q6NZY7 148 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 UNC5DQ6UXZ4 953 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 RNF180Q86T96 592 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 OR9K2Q8NGE7 335 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 CA5BP1Q8WTZ4 195 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 METTL21AQ8WXB1 218 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 TAAR1Q96RJ0 339 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 SYT3Q9BQG1 590 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 PDCD2LQ9BRP1 358 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 HERPUD2Q9BSE4 406 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 NRIP3Q9NQ35 241 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 BTG4Q9NY30 223 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 KIDINS220Q9ULH0 1771 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 F2P00734 622 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 GRK6P43250 576 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 HNRNPA3P51991 378 aaKnown RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 LTB4RQ15722 352 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 FRMPD2BQ6IN97 320 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 ANKRD16Q6P6B7 361 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 RBM23Q86U06 439 aaKnown RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.89□□□□□ -1.47
CLK3-212ENST00000563418 NLGN1Q8N2Q7 840 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 CCDC71LQ8N9Z2 235 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 OR52N2Q8NGI0 321 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 OR5M9Q8NGP3 310 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 SMIM4Q8WVI0 70 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 RPL10LQ96L21 214 aaKnown RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 OSBPL2Q9H1P3 480 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 GIMAP2Q9UG22 337 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 OR5H15A6NDH6 313 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 OR5H1A6NKK0 313 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 TRAF3IP2O43734 574 aaPredicted RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 AIFM1O95831 613 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 GALTP07902 379 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 EPXP11678 715 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 POU3F3P20264 500 aaPredicted RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 PJVKQ0ZLH3 352 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 LEMD1Q68G75 181 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 UNQ6126/PRO20091Q6UXV3 157 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 NUDT13Q86X67 352 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 APCDD1Q8J025 514 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 GPR152Q8TDT2 470 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 CSF3RQ99062 836 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 KATNB1Q9BVA0 655 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 ADAP2Q9NPF8 381 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 DHDHQ9UQ10 334 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 OR5H14A6NHG9 310 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 RNASEK-C17orf49H0YIS7 233 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 SCAMP2O15127 329 aaKnown RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 GCGP01275 180 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 ATP5A1P25705 553 aaKnown RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 PTGFRP43088 359 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 CSNK1EP49674 416 aaKnown RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 RABGGTBP53611 331 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 NSUN5P2Q63ZY6 315 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 SP8Q8IXZ3 490 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 PROKR1Q8TCW9 393 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 ZNF426Q9BUY5 554 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 ADAM19Q9H013 955 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 C1orf123Q9NWV4 160 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 SYN3O14994 580 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 TXNDC12O95881 172 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 ADRB3P13945 408 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 CX3CR1P49238 355 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 AKR1C2P52895 323 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 ATXN7L2Q5T6C5 722 aaPredicted RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 C9orf64Q5T6V5 341 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 GRINAQ7Z429 371 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 KIAA0907Q7Z7F0 614 aaPredicted RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 SGPP2Q8IWX5 399 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 ZNF485Q8NCK3 441 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 TGM7Q96PF1 710 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 OR5M11Q96RB7 305 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 RYDENQ9NUL5 291 aaKnown RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 CBLCQ9ULV8 474 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 C5P01031 1676 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 GLTPD2A6NH11 291 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 RNASET2O00584 256 aaKnown RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 PDYNP01213 254 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 HSPB3Q12988 150 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 KCNAB1Q14722 419 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 ACSM3Q53FZ2 586 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 CXorf40AQ8TE69 158 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 MITD1Q8WV92 249 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 LINC01599Q8WXQ3 324 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 IMP4Q96G21 291 aaKnown RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 ADAD1Q96M93 576 aaKnown RBP5.89□□□□□ -1.47
CLK3-212ENST00000563418 PRAP1Q96NZ9 151 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 MCOLN1Q9GZU1 580 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 V9GY05 133 aa5.89□□□□□ -1.47
CLK3-212ENST00000563418 A0A0B4J2A0 478 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 OR5K4A6NMS3 321 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 H7C4K7 107 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 CACNB4O00305 520 aaPredicted RBP5.88□□□□□ -1.47
CLK3-212ENST00000563418 SMAD9O15198 467 aaKnown RBP5.88□□□□□ -1.47
CLK3-212ENST00000563418 MT-CO2P00403 227 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 FGF9P31371 208 aaPredicted RBP5.88□□□□□ -1.47
CLK3-212ENST00000563418 GPR1P46091 355 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 HTRA3P83110 453 aa5.88□□□□□ -1.47
CLK3-212ENST00000563418 SLC10A1Q14973 349 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms