RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 MAGEA8P43361 318 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 SLC6A8P48029 635 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 CPA2P48052 419 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 MRPL19P49406 292 aaKnown RBP17.06■□□□□ 0.32
TRADD-203ENST00000563348 CHRNEQ04844 493 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 SKP2Q13309 424 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 CBFBQ13951 182 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 FGFBP1Q14512 234 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 DAZAP2Q15038 168 aaPredicted RBP17.06■□□□□ 0.32
TRADD-203ENST00000563348 GUSBP1Q15486 140 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 GPAT3Q53EU6 434 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 HBMQ6B0K9 141 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 VWA1Q6PCB0 445 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 OR9I1Q8NGQ6 314 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 ZFP90Q8TF47 636 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 OSTF1Q92882 214 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 TRNT1Q96Q11 434 aaKnown RBP17.06■□□□□ 0.32
TRADD-203ENST00000563348 CCDC28BQ9BUN5 200 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 RMND5AQ9H871 391 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 SLC6A13Q9NSD5 602 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 GALNT8Q9NY28 637 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 MCTS1Q9ULC4 181 aaKnown RBP17.06■□□□□ 0.32
TRADD-203ENST00000563348 OTOGQ6ZRI0 2925 aa17.06■□□□□ 0.32
TRADD-203ENST00000563348 FAM234BA2RU67 622 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 POLR3GO15318 223 aaPredicted RBP17.05■□□□□ 0.32
TRADD-203ENST00000563348 CYP7B1O75881 506 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 SYNGR4O95473 234 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 H6PDO95479 791 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 CGAP01215 116 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 EPXP11678 715 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 PGM1P36871 562 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 PCYT1AP49585 367 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 CCR4P51679 360 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 CARD18P57730 90 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 SIRPAP78324 504 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 QPRTQ15274 297 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 SYPL1Q16563 259 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 COX20Q5RI15 118 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 LRRC74BQ6ZQY2 392 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 FAM214BQ7L5A3 538 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 TMEM200AQ86VY9 491 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 TMCO5AQ8N6Q1 288 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 ANKFN1Q8N957 763 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 LINC01560Q8TB33 94 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 CKAP2Q8WWK9 683 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 ITCHQ96J02 903 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 EBF4Q9BQW3 602 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 THUMPD3Q9BV44 507 aaKnown RBP17.05■□□□□ 0.32
TRADD-203ENST00000563348 SLC35A3Q9Y2D2 325 aa17.05■□□□□ 0.32
TRADD-203ENST00000563348 GJE1A6NN92 205 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 SMNDC1O75940 238 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRADD-203ENST00000563348 SASH3O75995 380 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 UBTFL6P0CB48 400 aaPredicted RBP17.04■□□□□ 0.32
TRADD-203ENST00000563348 CD8BP10966 210 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 SHC1P29353 583 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 SFTPDP35247 375 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 MVDP53602 400 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 AQP5P55064 265 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 KCNJ10P78508 379 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 HPCAP84074 193 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 TMEM176BQ3YBM2 270 aaPredicted RBP17.04■□□□□ 0.32
TRADD-203ENST00000563348 PPP4R4Q6NUP7 873 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 ZNF474Q6S9Z5 364 aaPredicted RBP17.04■□□□□ 0.32
TRADD-203ENST00000563348 FAM71CQ8NEG0 241 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 PNPT1Q8TCS8 783 aaKnown RBP17.04■□□□□ 0.32
TRADD-203ENST00000563348 ST8SIA1Q92185 356 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 PMM1Q92871 262 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 VPS33AQ96AX1 596 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 SLC38A1Q9H2H9 487 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 MTHFD2LQ9H903 347 aaPredicted RBP17.04■□□□□ 0.32
TRADD-203ENST00000563348 TPT1P8Q9HAU6 139 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 TIGARQ9NQ88 270 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 RASSF1Q9NS23 344 aa17.04■□□□□ 0.32
TRADD-203ENST00000563348 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.04■□□□□ 0.32
TRADD-203ENST00000563348 A6NNC1 897 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 ANP32DO95626 131 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 CHRM4P08173 479 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 PGCP20142 388 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 SESN3P58005 492 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 STX1BP61266 288 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 FAM27E3Q08E93 113 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 TIGD2Q4W5G0 525 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 DNAJC14Q6Y2X3 702 aaPredicted RBP17.03■□□□□ 0.32
TRADD-203ENST00000563348 TMEM234Q8WY98 164 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 GTF2H4Q92759 462 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 GMPPAQ96IJ6 420 aaPredicted RBP17.03■□□□□ 0.32
TRADD-203ENST00000563348 MAGEB18Q96M61 343 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 DACH2Q96NX9 599 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 OPN3Q9H1Y3 402 aaPredicted RBP17.03■□□□□ 0.32
TRADD-203ENST00000563348 GLRX2Q9NS18 164 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 ACER3Q9NUN7 267 aa17.03■□□□□ 0.32
TRADD-203ENST00000563348 DNAJB12Q9NXW2 375 aaKnown RBP17.03■□□□□ 0.32
TRADD-203ENST00000563348 AGAP5A6NIR3 686 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 SS18L1O75177 396 aaPredicted RBP17.02■□□□□ 0.32
TRADD-203ENST00000563348 BCAS1O75363 584 aaPredicted RBP17.02■□□□□ 0.32
TRADD-203ENST00000563348 PABPC4LP0CB38 370 aaKnown RBP17.02■□□□□ 0.32
TRADD-203ENST00000563348 NR2F1P10589 423 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 NID1P14543 1247 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 SELENBP1Q13228 472 aa17.02■□□□□ 0.32
TRADD-203ENST00000563348 C6orf10Q5SRN2 563 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms