RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CA10Q9NS85 328 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 ACSS1Q9NUB1 689 aaPredicted RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 DMGDHQ9UI17 866 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 MRTO4Q9UKD2 239 aaKnown RBP6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 GRIP1Q9Y3R0 1128 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 PTGDR2Q9Y5Y4 395 aa6.7□□□□□ -1.34
HERPUD1-206ENST00000563343 A0A1W2PQD3 144 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 TMEM129A0AVI4 362 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 CCT8L1PA6NM43 557 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 GJE1A6NN92 205 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 ZNF716A6NP11 495 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 LYNX1G3V0Z9 82 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 WNT9BO14905 357 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 NKX2-2O95096 273 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 H6PDO95479 791 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 PDYNP01213 254 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 FSHBP01225 129 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 LYNX1P0DP58 116 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 IFNGR1P15260 489 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 GABRA3P34903 492 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 ZNF117Q03924 483 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 IFT88Q13099 833 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 PPP1R7Q15435 360 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 TOMM34Q15785 309 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 SLC25A53Q5H9E4 307 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 OR7E24Q6IFN5 339 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 SHQ1Q6PI26 577 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 CBLN3Q6UW01 205 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 TMEM107Q6UX40 140 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 ZNF662Q6ZS27 426 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 C1QL2Q7Z5L3 287 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 SAMD14Q8IZD0 417 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 C17orf78Q8N4C9 275 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 OR4F6Q8NGB9 312 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 B4GALNT2Q8NHY0 566 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 UBASH3BQ8TF42 649 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 WDR60Q8WVS4 1066 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 LRRC58Q96CX6 371 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 ELP4Q96EB1 424 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 C1orf147Q96MC9 270 aaPredicted RBP6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 NSUN5Q96P11 429 aaKnown RBP6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 DOK1Q99704 481 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 CPNE1Q99829 537 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 PKP2Q99959 881 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 TMPRSS13Q9BYE2 586 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 RAB1BQ9H0U4 201 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 BRF2Q9HAW0 419 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 LPAR2Q9HBW0 351 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 HHATLQ9HCP6 504 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 ASB6Q9NWX5 421 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 RNF14Q9UBS8 474 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 MCM8Q9UJA3 840 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 PCDHB14Q9Y5E9 798 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 ACTL7BQ9Y614 415 aa6.69□□□□□ -1.34
HERPUD1-206ENST00000563343 COL7A1Q02388 2944 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 IGHV1-18A0A0C4DH31 117 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 SYCE1LA8MT33 242 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 ETV2O00321 342 aaPredicted RBP6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 SLITRK5O94991 958 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 KCNH1O95259 989 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 ESRRBO95718 433 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 PNPP00491 289 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 JUNP05412 331 aaKnown RBP6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 IFI6P09912 130 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 OR4A8P0C604 315 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 GAAP10253 952 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 GFAPP14136 432 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 CHN1P15882 459 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 PRKCAP17252 672 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 SSTR1P30872 391 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 MPIP34949 423 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 CCNG1P51959 295 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 ARL4CP56559 192 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 LMO4P61968 165 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 PDIA2Q13087 525 aaKnown RBP6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 SELENBP1Q13228 472 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 PDK3Q15120 406 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 SGO1Q5FBB7 561 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 C1QTNF12Q5T7M4 302 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 LETMD1Q6P1Q0 360 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 SPATA19Q7Z5L4 167 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 MISPQ8IVT2 679 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 C1orf162Q8NEQ5 155 aaPredicted RBP6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 ATP6V1C2Q8NEY4 427 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 TOR1AIP2Q8NFQ8 470 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 OR52E4Q8NGH9 312 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 C16orf78Q8WTQ4 265 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 APH1AQ96BI3 265 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 BOD1Q96IK1 185 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 GPR78Q96P69 363 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 C1QTNF5Q9BXJ0 243 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 GLIPR2Q9H4G4 154 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 SENP1Q9P0U3 644 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 DCTN4Q9UJW0 460 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 ZNF225Q9UK10 706 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 PCTPQ9UKL6 214 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 ICAM5Q9UMF0 924 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 AMDHD2Q9Y303 409 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 PPIAL4AQ9Y536 164 aa6.68□□□□□ -1.34
HERPUD1-206ENST00000563343 TNPO3Q9Y5L0 923 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms