RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 H0Y3Z8 333 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 H3BML4 177 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 C19orf84I3L1E1 186 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 AP3D1O14617 1153 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 ANGPT2O15123 496 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 ADAMDEC1O15204 470 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 SLC22A2O15244 555 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 SNX3O60493 162 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 HNRNPCL1O60812 293 aaKnown RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 GCM2O75603 506 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 KRT34O76011 436 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 PGM3O95394 542 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 CLDN14O95500 239 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 TGM6O95932 706 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 OPN1LWP04000 364 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 DBIP07108 87 aaKnown RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 UBTFL6P0CB48 400 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 HNRNPCL4P0DMR1 293 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 GP1BBP13224 206 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 NID1P14543 1247 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 POU3F2P20265 443 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 PPIBP23284 216 aaKnown RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 ADH6P28332 368 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 CHRNB4P30926 498 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 GCKP35557 465 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 TIMP3P35625 211 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 ZNF41P51814 821 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 ZNF136P52737 540 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 CRISP3P54108 245 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 MTPNP58546 118 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 RAC1P63000 192 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 GNGT1P63211 74 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 EEF1A1P68104 462 aaKnown RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 HPCAP84074 193 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 TFF3Q07654 80 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 NFYCQ13952 458 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 CAPRIN1Q14444 709 aaKnown RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 QPRTQ15274 297 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 COQ5Q5HYK3 327 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 MRPL2Q5T653 305 aaKnown RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 PRAMEF8Q5VWM4 474 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 PRAMEF7Q5VXH5 474 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 REP15Q6BDI9 236 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 ZNF836Q6ZNA1 936 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 NET1Q7Z628 596 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 MTDHQ86UE4 582 aaKnown RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 COMTD1Q86VU5 262 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 SNX32Q86XE0 403 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 PTOV1Q86YD1 416 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 LACC1Q8IV20 430 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 CLIP4Q8N3C7 705 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 METTL25Q8N6Q8 603 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 OR52P1PQ8NH57 321 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 MBD3L2Q8NHZ7 208 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 FBXO27Q8NI29 283 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 WDR60Q8WVS4 1066 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 SDCCAG3Q96C92 435 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 ZNF845Q96IR2 970 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 SLC39A3Q9BRY0 314 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 CCDC106Q9BWC9 280 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 UCK2Q9BZX2 261 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 RAD21L1Q9H4I0 556 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 TMEM38AQ9H6F2 299 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 KAT8Q9H7Z6 458 aaKnown RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 EXOSC3Q9NQT5 275 aaKnown RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 RLIMQ9NVW2 624 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 THUMPD1Q9NXG2 353 aaKnown RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 DNAJB12Q9NXW2 375 aaKnown RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 SLC35A3Q9Y2D2 325 aa7.69□□□□□ -1.18
UBR1-204ENST00000563239 KLF2Q9Y5W3 355 aaPredicted RBP7.69□□□□□ -1.18
UBR1-204ENST00000563239 ARHGAP21Q5T5U3 1957 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 FBN3Q75N90 2809 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 HEATR5AQ86XA9 2040 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 TACC2O95359 2948 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 A0A0J9YW62 118 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 CDHR4A6H8M9 788 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 SEC14L5O43304 696 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 CYP7B1O75881 506 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 THBS1P07996 1170 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 HTR1EP28566 365 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 EIF1P41567 113 aaKnown RBP7.68□□□□□ -1.18
UBR1-204ENST00000563239 ACAA2P42765 397 aaKnown RBP7.68□□□□□ -1.18
UBR1-204ENST00000563239 SLC6A8P48029 635 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 CCR4P51679 360 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 SESN3P58005 492 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 CDK6Q00534 326 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 FOXF2Q12947 444 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 CBFBQ13951 182 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 TRMT5Q32P41 509 aaKnown RBP7.68□□□□□ -1.18
UBR1-204ENST00000563239 RABL3Q5HYI8 236 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 GCNT6Q5T4J0 391 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 NANOGP8Q6NSW7 305 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 PLEKHM3Q6ZWE6 761 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 PIGWQ7Z7B1 504 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 CALHM3Q86XJ0 350 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 GRAMD2AQ8IUY3 354 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 CMIPQ8IY22 773 aa7.68□□□□□ -1.18
UBR1-204ENST00000563239 ZZZ3Q8IYH5 903 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms