RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 LY6G6EA0A0G2JKS1 128 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 IGKV3-11P04433 115 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 HMGN1P05114 100 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 LIMS3P0CW19 117 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 LIMS4P0CW20 117 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 MYL12AP19105 171 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 ENDOUP21128 410 aaKnown RBP17.58■□□□□ 0.4
SMPD3-203ENST00000563226 MLLT11Q13015 90 aaPredicted RBP17.58■□□□□ 0.4
SMPD3-203ENST00000563226 ARHGAP40Q5TG30 622 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 LIPKQ5VXJ0 399 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 PMS2CLQ68D20 193 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 ZNF550Q7Z398 422 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 LAPTM4BQ86VI4 370 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 CDK20Q8IZL9 346 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 OR52L1Q8NGH7 329 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 ZNF721Q8TF20 911 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 OTULINQ96BN8 352 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 DPYSL5Q9BPU6 564 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 CDADC1Q9BWV3 514 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 ZNF768Q9H5H4 540 aaKnown RBP17.58■□□□□ 0.4
SMPD3-203ENST00000563226 U3KQA8 63 aa17.58■□□□□ 0.4
SMPD3-203ENST00000563226 ZC3H12DA2A288 527 aaKnown RBP17.57■□□□□ 0.4
SMPD3-203ENST00000563226 MAGEB3O15480 346 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 OIP5O43482 229 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 PSMD4P55036 377 aaKnown RBP17.57■□□□□ 0.4
SMPD3-203ENST00000563226 CSTF1Q05048 431 aaKnown RBP17.57■□□□□ 0.4
SMPD3-203ENST00000563226 C1DQ13901 141 aaKnown RBP17.57■□□□□ 0.4
SMPD3-203ENST00000563226 ZNF404Q494X3 552 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 KLHL26Q53HC5 615 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 PERM1Q5SV97 790 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 NXNL2Q5VZ03 156 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 FCRLBQ6BAA4 426 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 DESI1Q6ICB0 168 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 PLBD1Q6P4A8 553 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 LINC00114Q6XXX2 140 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 LINC00299Q6ZSB3 139 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 CXXC5Q7LFL8 322 aaKnown RBP17.57■□□□□ 0.4
SMPD3-203ENST00000563226 PHC2Q8IXK0 858 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 MAFAQ8NHW3 353 aaPredicted RBP17.57■□□□□ 0.4
SMPD3-203ENST00000563226 TM9SF4Q92544 642 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 HCAR1Q9BXC0 346 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 HMG20AQ9NP66 347 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 NDUFB11Q9NX14 153 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 SERTAD3Q9UJW9 196 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 CLCA3PQ9Y6N3 262 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 A0A1B0GX78 115 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 TCRBV16S1A1N1A0A5B0 115 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 CPED1A4D0V7 1026 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 LRRTM2O43300 516 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 PTP4A3O75365 173 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 BMP7P18075 431 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 CRYBB2P43320 205 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 WNT4P56705 351 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 CRYZQ08257 329 aaKnown RBP17.57■□□□□ 0.4
SMPD3-203ENST00000563226 BIKQ13323 160 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 FHL1Q13642 323 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 CD226Q15762 336 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 TIMM50Q3ZCQ8 353 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 LHFPL3Q86UP9 236 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 LNX2Q8N448 690 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 GATAD2BQ8WXI9 593 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 RFKQ969G6 155 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 DACH2Q96NX9 599 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 IFT27Q9BW83 186 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 NUDT9Q9BW91 350 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 RACGAP1Q9H0H5 632 aa17.57■□□□□ 0.4
SMPD3-203ENST00000563226 EXOSC4Q9NPD3 245 aaKnown RBP17.57■□□□□ 0.4
SMPD3-203ENST00000563226 PNMA8CA0A1B0GUJ8 204 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 IRGMA1A4Y4 181 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 TTC36A6NLP5 189 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 RCBTB2O95199 551 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 TDGF1P13385 188 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 HTR1FP30939 366 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 RBM34P42696 430 aaKnown RBP17.56■□□□□ 0.4
SMPD3-203ENST00000563226 PPICP45877 212 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 INAQ16352 499 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 APOOLQ6UXV4 268 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 KMT5CQ86Y97 462 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 SNX29P2Q8IUI4 249 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 CMIPQ8IY22 773 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 PRR22Q8IZ63 422 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 SLC35B4Q969S0 331 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 SLC46A1Q96NT5 459 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 WDR12Q9GZL7 423 aaKnown RBP17.56■□□□□ 0.4
SMPD3-203ENST00000563226 NRSN2Q9GZP1 204 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 CCDC59Q9P031 241 aaKnown RBP17.56■□□□□ 0.4
SMPD3-203ENST00000563226 CTSFQ9UBX1 484 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 PILRBQ9UKJ0 227 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 A0A1B0GTQ1 180 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 TMEM129A0AVI4 362 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 LRRN3E7EW58 273 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 POLR1CO15160 346 aaPredicted RBP17.56■□□□□ 0.4
SMPD3-203ENST00000563226 MSL3P1P0C860 447 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 RORAP35398 523 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 TMED1Q13445 227 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 ELAVL1Q15717 326 aaKnown RBP17.56■□□□□ 0.4
SMPD3-203ENST00000563226 FNDC7Q5VTL7 733 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 ULK3Q6PHR2 472 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 SIRT6Q8N6T7 355 aa17.56■□□□□ 0.4
SMPD3-203ENST00000563226 ADIPOR1Q96A54 375 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms