RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 ZNF700Q9H0M5 742 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 POLR1BQ9H9Y6 1135 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 C20orf141Q9NUB4 165 aa16.54■□□□□ 0.24
COMMD4-208ENST00000563220 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-208ENST00000563220 OR6C70A6NIJ9 312 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 ALG1L2C9J202 215 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 CDC42EP2O14613 210 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 ZNF264O43296 627 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 FADS1O60427 444 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 PPM1BO75688 479 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 NGFRP08138 427 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 FPR3P25089 353 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 RPS18P62269 152 aaKnown RBP16.53■□□□□ 0.24
COMMD4-208ENST00000563220 PSPHP78330 225 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 TOP3AQ13472 1001 aaPredicted RBP16.53■□□□□ 0.24
COMMD4-208ENST00000563220 BTBD16Q32M84 506 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 ALG10BQ5I7T1 473 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 CCDC103Q8IW40 242 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 WDR36Q8NI36 951 aaKnown RBP16.53■□□□□ 0.24
COMMD4-208ENST00000563220 CT55Q8WUE5 264 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 ZNF566Q969W8 418 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 ZNF524Q96C55 264 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 NMD3Q96D46 503 aaKnown RBP16.53■□□□□ 0.24
COMMD4-208ENST00000563220 PLA2G12AQ9BZM1 189 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 EGLN3Q9H6Z9 239 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 EXOSC3Q9NQT5 275 aaKnown RBP16.53■□□□□ 0.24
COMMD4-208ENST00000563220 CEPT1Q9Y6K0 416 aa16.53■□□□□ 0.24
COMMD4-208ENST00000563220 A0A1W2PQD3 144 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 CELA2AP08217 269 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 CCDC159P0C7I6 412 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 EEF1B2P24534 225 aaKnown RBP16.52■□□□□ 0.24
COMMD4-208ENST00000563220 CXCR4P61073 352 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 SLX4IPQ5VYV7 408 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 ULK3Q6PHR2 472 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 LINC00114Q6XXX2 140 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 RASSF6Q6ZTQ3 369 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 DEPDC4Q8N2C3 294 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 IQCF1Q8N6M8 205 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 ZNF426Q9BUY5 554 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 LAT2Q9GZY6 243 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 ATP13A2Q9NQ11 1180 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 MEPEQ9NQ76 525 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-208ENST00000563220 PAK1IP1Q9NWT1 392 aaPredicted RBP16.52■□□□□ 0.24
COMMD4-208ENST00000563220 MYOTQ9UBF9 498 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 TCFL5Q9UL49 500 aa16.52■□□□□ 0.24
COMMD4-208ENST00000563220 SPAARA0A1B0GVQ0 90 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 PTGES3LE9PB15 166 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 KPNA4O00629 521 aaPredicted RBP16.52■□□□□ 0.23
COMMD4-208ENST00000563220 SOCS6O14544 535 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 ADAM10O14672 748 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 DKK1O94907 266 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 MAKP20794 623 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 STAT5AP42229 794 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 GIPRP48546 466 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 FBXW4P57775 412 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 CDC42P60953 191 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 ZNF117Q03924 483 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 PRKCDQ05655 676 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 PIGFQ07326 219 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 C12orf73Q69YU5 71 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 OR11G2Q8NGC1 345 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 OR5M3Q8NGP4 307 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 SH3YL1Q96HL8 342 aaPredicted RBP16.52■□□□□ 0.23
COMMD4-208ENST00000563220 DEFB126Q9BYW3 111 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 TBL1XR1Q9BZK7 514 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 RPS6KB2Q9UBS0 482 aa16.52■□□□□ 0.23
COMMD4-208ENST00000563220 NDUFB5O43674 189 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 CD63P08962 238 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 RAB40ALP0C0E4 278 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 IFI30P13284 250 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 EVI2BP34910 448 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 CCR4P51679 360 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 COPZ1P61923 177 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 CDK5Q00535 292 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 GINS1Q14691 196 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 TMEM164Q5U3C3 297 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 ACSM5Q6NUN0 579 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 P3H2Q8IVL5 708 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 OR8D4Q8NGM9 314 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 C3orf49Q96BT1 292 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 DTNBP1Q96EV8 351 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 MPP4Q96JB8 637 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 HS6ST2Q96MM7 605 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 NODALQ96S42 347 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 DPH1Q9BZG8 443 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 IMPAD1Q9NX62 359 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 FARSAQ9Y285 508 aaKnown RBP16.51■□□□□ 0.23
COMMD4-208ENST00000563220 MED31Q9Y3C7 131 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 KNTC1P50748 2209 aa16.51■□□□□ 0.23
COMMD4-208ENST00000563220 GNB5O14775 395 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 HTR1AP08908 422 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 CDK4P11802 303 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 FUT1P19526 365 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 EFR3AQ14156 821 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 ZNF773Q6PK81 442 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 LYPD8Q6UX82 237 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 MARCH9Q86YJ5 346 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 TMCO5AQ8N6Q1 288 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 HGDQ93099 445 aa16.5■□□□□ 0.23
COMMD4-208ENST00000563220 RHNO1Q9BSD3 238 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms