RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 SLC2A10O95528 541 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 HPP00738 406 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 HSMCR30P0CW71 290 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 DBTP11182 482 aaKnown RBP2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 LAMP1P11279 417 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 BCKDHAP12694 445 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 CCDC130P13994 396 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 GCAP28676 217 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 CDH5P33151 784 aaPredicted RBP2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 EPHX2P34913 555 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 XCR1P46094 333 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 OR1D4P47884 311 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 FNTAP49354 379 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 CCT3P49368 545 aaKnown RBP2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 TPMTP51580 245 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 AP3M2P53677 418 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 CCNA1P78396 465 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 VLDLRP98155 873 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 ENPEPQ07075 957 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 ZFP36L1Q07352 338 aaKnown RBP2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 NCBP1Q09161 790 aaKnown RBP2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 MRPL28Q13084 256 aaKnown RBP2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 C1orf61Q13536 156 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 NDUFA9Q16795 377 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 CYP51A1Q16850 503 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 OR4F3Q6IEY1 312 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 VITQ6UXI7 678 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 STAC2Q6ZMT1 411 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 KDM7AQ6ZMT4 941 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 SH2D6Q7Z4S9 175 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 NANOGNBQ7Z5D8 188 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 FAM228AQ86W67 206 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 CCDC65Q8IXS2 484 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 SPAG16Q8N0X2 631 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 KIR3DL3Q8N743 410 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 CSNK1A1LQ8N752 337 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 MFSD9Q8NBP5 474 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 SDR9C7Q8NEX9 313 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 BEST4Q8NFU0 473 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 OR4D9Q8NGE8 314 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 OR9A4Q8NGU2 314 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 SCFD1Q8WVM8 642 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 ARNTL2Q8WYA1 636 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 RAPGEF5Q92565 580 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 NT5C3BQ969T7 300 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 PSMG2Q969U7 264 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 ZBED6CLQ96FA7 236 aaPredicted RBP2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 NPY6RQ99463 290 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 SGK2Q9HBY8 427 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 TM9SF3Q9HD45 589 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 AMBNQ9NP70 447 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 MIEF1Q9NQG6 463 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 FAM120CQ9NX05 1096 aaKnown RBP2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 ZNF581Q9P0T4 197 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 CTNNA3Q9UI47 895 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 NAP1L2Q9ULW6 460 aaPredicted RBP2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 PIGLQ9Y2B2 252 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 IFT52Q9Y366 437 aa2.52□□□□□ -2.01
SHCBP1-202ENST00000563219 PCP4L1A6NKN8 68 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 SH3BGRLO75368 114 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 SCGNO76038 276 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 POU2F1P14859 743 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 SERPINA2P20848 420 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 HNRNPH3P31942 346 aaKnown RBP2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 NF2P35240 595 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 ELK3P41970 407 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 ALDH3B2P48448 385 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 TDO2P48775 406 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 CEBPDP49716 269 aaPredicted RBP2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 ERVPABLB-1P60509 514 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 RPS8P62241 208 aaKnown RBP2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 RAB40BQ12829 278 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 RUNX3Q13761 415 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 SERTAD2Q14140 314 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 KCNJ11Q14654 390 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 MICAQ29983 383 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 SLC25A52Q3SY17 297 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 PRAMEF5Q5TYX0 476 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 PRAMEF20Q5VT98 475 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 PRAMEF6Q5VXH4 476 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 PVRIGQ6DKI7 326 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 SPINK14Q6IE38 97 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 FAM71F2Q6NXP2 309 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 FAM199XQ6PEV8 388 aaPredicted RBP2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 P2RY8Q86VZ1 359 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 TPRA1Q86W33 373 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 MARCH9Q86YJ5 346 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 HIPK1Q86Z02 1210 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 LRRC75A-AS1Q8N1F1 130 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 AENQ8WTP8 325 aaKnown RBP2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 BADQ92934 168 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 C10orf35Q96D05 121 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 PPP1R16AQ96I34 528 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 CELF6Q96J87 481 aaKnown RBP2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 C9orf85Q96MD7 179 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 FMO2Q99518 471 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 COPS8Q99627 209 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 CITED1Q99966 193 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 CCDC77Q9BR77 488 aa2.51□□□□□ -2.01
SHCBP1-202ENST00000563219 SLC30A2Q9BRI3 323 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms