RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 K7ESM1 405 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 PRODHO43272 600 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 CDC123O75794 336 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 AKR7A3O95154 331 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 GIPRP48546 466 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 MMP15P51511 669 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 LRRC74AQ0VAA2 488 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 ZNF155Q12901 538 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 DDX39BQ13838 428 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 KLF9Q13886 244 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 FRG2Q64ET8 278 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 SFXN4Q6P4A7 337 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 PARS2Q7L3T8 475 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 SVBPQ8N300 66 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 OR4F15Q8NGB8 312 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 ELP5Q8TE02 316 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 ASB11Q8WXH4 323 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 WNT2BQ93097 391 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 PEX11GQ96HA9 241 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 FRG2BQ96QU4 278 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 C7orf50Q9BRJ6 194 aaKnown RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC25A32Q9H2D1 315 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC32A1Q9H598 525 aa13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 ZNF282Q9UDV7 671 aaPredicted RBP13.06□□□□□ -0.32
GTF3C1-203ENST00000562609 DOCK9Q9BZ29 2069 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 A0A1B0GUH1 482 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC9B1P1A6NJY1 282 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 TMEM200CA6NKL6 621 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 ELFN1P0C7U0 828 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 RNF224P0DH78 156 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 PDHA2P29803 388 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC25A30Q5SVS4 291 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 FAM27D1Q5T7N8 215 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 ESPNLQ6ZVH7 1005 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 TECPR1Q7Z6L1 1165 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 KLBQ86Z14 1044 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 TMEM185AQ8NFB2 350 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 OR4K1Q8NGD4 311 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 PHOSPHO1Q8TCT1 267 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 SPRYD4Q8WW59 207 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 KAT2AQ92830 837 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 MS4A4EQ96PG1 132 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC35A5Q9BS91 424 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 BTBD1Q9H0C5 482 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 QRSL1Q9H0R6 528 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 ASB6Q9NWX5 421 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 MBD2Q9UBB5 411 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 LHX6Q9UPM6 363 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 F5P12259 2224 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 IRGMA1A4Y4 181 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 LRRN3E7EW58 273 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 OR2A4O95047 310 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 NFATC1O95644 943 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 CISD3P0C7P0 127 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 PSMB1P20618 241 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 AKR1C2P52895 323 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 AKR1C1Q04828 323 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 TSTA3Q13630 321 aaPredicted RBP13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 ZNF805Q5CZA5 627 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 MANEAQ5SRI9 462 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 IKBIPQ70UQ0 350 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 SPAG16Q8N0X2 631 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 RASGEF1AQ8N9B8 481 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 FAM71CQ8NEG0 241 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 DMBX1Q8NFW5 382 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 OR5AK3PQ8NH89 298 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 KCTD12Q96CX2 325 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 OR2A7Q96R45 310 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 LRRN3Q9H3W5 708 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 AUNIPQ9H7T9 357 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 MRPS18AQ9NVS2 196 aaKnown RBP13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 MKL2Q9ULH7 1088 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 MYO15AQ9UKN7 3530 aa13.05□□□□□ -0.32
GTF3C1-203ENST00000562609 HMSDA8MTL9 139 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 WRBO00258 174 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 FAAHO00519 579 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 RGS9O75916 674 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 UBL3O95164 117 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 NR0B1P51843 470 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 HBA1P69905 142 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 STX4Q12846 297 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 TRAM2Q15035 370 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 C9orf50Q5SZB4 431 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 ADNP2Q6IQ32 1131 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC30A6Q6NXT4 461 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 PSRC1Q6PGN9 363 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 ZC3H14Q6PJT7 736 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 THAP6Q8TBB0 222 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 RXFP4Q8TDU9 374 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC12A9Q9BXP2 914 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 C1GALT1Q9NS00 363 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 CCDC88CQ9P219 2028 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 FBXW2Q9UKT8 454 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 RD3LP0DJH9 198 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 ST8SIA6P61647 398 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 MLLT1Q03111 559 aaPredicted RBP13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 FAM78AQ5JUQ0 283 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 HENMT1Q5T8I9 393 aaKnown RBP13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 ANXA8L1Q5VT79 327 aa13.04□□□□□ -0.32
GTF3C1-203ENST00000562609 SLC25A28Q96A46 364 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms