RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 MRPL15Q9P015 296 aaKnown RBP12.38□□□□□ -0.43
CLK3-206ENST00000562078 PRNPP04156 253 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 ETFAP13804 333 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 LTBRP36941 435 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 PRLHRP49683 370 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 VASPP50552 380 aaPredicted RBP12.37□□□□□ -0.43
CLK3-206ENST00000562078 AKR1C2P52895 323 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 RAG2P55895 527 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 PFN3P60673 137 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 AKR1C1Q04828 323 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 TMEM115Q12893 351 aaPredicted RBP12.37□□□□□ -0.43
CLK3-206ENST00000562078 RUNX3Q13761 415 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 UBXN2BQ14CS0 331 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 SEC23BQ15437 767 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 SF1Q15637 639 aaKnown RBP12.37□□□□□ -0.43
CLK3-206ENST00000562078 OCLNQ16625 522 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 GAB4Q2WGN9 574 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 CCSMST1Q4G0I0 132 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 XKR6Q5GH73 641 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 C9orf152Q5JTZ5 239 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 AVPI1Q5T686 147 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 RXFP4Q8TDU9 374 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 SLC25A28Q96A46 364 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 ARRDC3Q96B67 414 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 DTD2Q96FN9 168 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 ZNF582Q96NG8 517 aaPredicted RBP12.37□□□□□ -0.43
CLK3-206ENST00000562078 MS4A4EQ96PG1 132 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 WDR26Q9H7D7 661 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 ZDHHC4Q9NPG8 344 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 GHRLQ9UBU3 117 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 NDOR1Q9UHB4 597 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 POM121BA6NF01 834 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 K7ESM1 405 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 PRF1P14222 555 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 GDI1P31150 447 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 CHIT1Q13231 466 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 ILKQ13418 452 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 ACER2Q5QJU3 275 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 DMRTC2Q8IXT2 367 aaPredicted RBP12.37□□□□□ -0.43
CLK3-206ENST00000562078 IL17RCQ8NAC3 791 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 OR11G2Q8NGC1 345 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 ELP5Q8TE02 316 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 THAP4Q8WY91 577 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 ELSPBP1Q96BH3 223 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 FBXO17Q96EF6 278 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 MED8Q96G25 268 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 ARHGAP9Q9BRR9 750 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 GAREM1Q9H706 876 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 NANSQ9NR45 359 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 SEMA3GQ9NS98 782 aa12.37□□□□□ -0.43
CLK3-206ENST00000562078 FXYD6-FXYD2A0A087WZ82 144 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 TMEM129A0AVI4 362 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 MEX3AA1L020 520 aaKnown RBP12.36□□□□□ -0.43
CLK3-206ENST00000562078 FFAR1O14842 300 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 SERPINA3P01011 423 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 HLA-DPB1P04440 258 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 S100A8P05109 93 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 LIMS3P0CW19 117 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 LIMS4P0CW20 117 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 OC90Q02509 493 aaPredicted RBP12.36□□□□□ -0.43
CLK3-206ENST00000562078 TAP2Q03519 686 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 SNTB2Q13425 540 aaKnown RBP12.36□□□□□ -0.43
CLK3-206ENST00000562078 HNRNPA1L2Q32P51 320 aaKnown RBP12.36□□□□□ -0.43
CLK3-206ENST00000562078 C9orf64Q5T6V5 341 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 TMEM220Q6QAJ8 160 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 TMEM17Q86X19 198 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 HDDC3Q8N4P3 179 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 NFKBIDQ8NI38 313 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 HMGB4Q8WW32 186 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 OR8D1Q8WZ84 308 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 EXOSC8Q96B26 276 aaKnown RBP12.36□□□□□ -0.43
CLK3-206ENST00000562078 FXYD6Q9H0Q3 95 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 RASD1Q9Y272 281 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 A0A1B0GV90 55 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 OR6C74A6NCV1 312 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 ANTXRLA6NF34 631 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 WRBO00258 174 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 SLC28A2O43868 658 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 PRAMEF2O60811 474 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 PRKRAO75569 313 aaKnown RBP12.36□□□□□ -0.43
CLK3-206ENST00000562078 LY86O95711 162 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 CD22P20273 847 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 NPR2P20594 1047 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 PDHA2P29803 388 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 GPX4P36969 197 aaPredicted RBP12.36□□□□□ -0.43
CLK3-206ENST00000562078 RAD52P43351 418 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 OR10A3P58181 314 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 PSMA6P60900 246 aaKnown RBP12.36□□□□□ -0.43
CLK3-206ENST00000562078 IRF8Q02556 426 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 MANEAQ5SRI9 462 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 FRG2Q64ET8 278 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 FCRLBQ6BAA4 426 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 ZNF852Q6ZMS4 543 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 SYT12Q8IV01 421 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 TBC1D19Q8N5T2 526 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 OR51Q1Q8NH59 317 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 ACOT12Q8WYK0 555 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 RNFT2Q96EX2 444 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 FRG2BQ96QU4 278 aa12.36□□□□□ -0.43
CLK3-206ENST00000562078 BARX1Q9HBU1 254 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms