RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 ATP6V1C2Q8NEY4 427 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 RFWD2Q8NHY2 731 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 MIPOL1Q8TD10 442 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 TESCQ96BS2 214 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 PIK3IP1Q96FE7 263 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 ZC3HAV1LQ96H79 300 aaKnown RBP9.19□□□□□ -0.94
CLK3-205ENST00000561673 SLC35G5Q96KT7 338 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 MARK4Q96L34 752 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 TEX37Q96LM6 180 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 SRXN1Q9BYN0 137 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 OR51I1Q9H343 314 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 TIGARQ9NQ88 270 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 MED13LQ71F56 2210 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 ABCA4P78363 2273 aa9.19□□□□□ -0.94
CLK3-205ENST00000561673 UQCRHLA0A096LP55 91 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 CENPVL1A0A0U1RR11 272 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 GJE1A6NN92 205 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 ETV2O00321 342 aaPredicted RBP9.18□□□□□ -0.94
CLK3-205ENST00000561673 SDHDO14521 159 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 UGT2B17O75795 530 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 CYP7B1O75881 506 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 C1QCP02747 245 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 THBDP07204 575 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 ALDOCP09972 364 aaKnown RBP9.18□□□□□ -0.94
CLK3-205ENST00000561673 UBL4AP11441 157 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 LOXP28300 417 aaPredicted RBP9.18□□□□□ -0.94
CLK3-205ENST00000561673 AGTR1P30556 359 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 HOXC12P31275 282 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 CLNS1AP54105 237 aaKnown RBP9.18□□□□□ -0.94
CLK3-205ENST00000561673 UFM1P61960 85 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 PPP2R2AP63151 447 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 FOXD4Q12950 439 aaPredicted RBP9.18□□□□□ -0.94
CLK3-205ENST00000561673 CBFBQ13951 182 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 QPRTQ15274 297 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 MAPK14Q16539 360 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 ZNF239Q16600 458 aaKnown RBP9.18□□□□□ -0.94
CLK3-205ENST00000561673 SLC25A53Q5H9E4 307 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 AP1ARQ63HQ0 302 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 SAXO2Q658L1 398 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 TNFAIP8L2Q6P589 184 aaPredicted RBP9.18□□□□□ -0.94
CLK3-205ENST00000561673 C16orf62Q7Z3J2 963 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 CROCCP2Q86T23 111 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 KIRREL3Q8IZU9 778 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 TMCO5AQ8N6Q1 288 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 VPS37AQ8NEZ2 397 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 TOR1AIP2Q8NFQ8 470 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 RNF128Q8TEB7 428 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 ABHD3Q8WU67 409 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 XAGE5Q8WWM1 108 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 CPNE4Q96A23 557 aaPredicted RBP9.18□□□□□ -0.94
CLK3-205ENST00000561673 ZG16BQ96DA0 208 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 ARSGQ96EG1 525 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 REXO5Q96IC2 774 aaKnown RBP9.18□□□□□ -0.94
CLK3-205ENST00000561673 MRGPRX4Q96LA9 322 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 HS3ST6Q96QI5 342 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 THUMPD3Q9BV44 507 aaKnown RBP9.18□□□□□ -0.94
CLK3-205ENST00000561673 ZNF350Q9GZX5 532 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 LAT2Q9GZY6 243 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 C12orf49Q9H741 205 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 EXD2Q9NVH0 621 aa9.18□□□□□ -0.94
CLK3-205ENST00000561673 TMEM120BA0PK00 339 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 PRAMEF27A3QJZ7 478 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 C9JVG2 144 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 E9PBE3 544 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 KIAA0513O60268 411 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 DNAJA2O60884 412 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 SNNO75324 88 aaPredicted RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 BCAS1O75363 584 aaPredicted RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 PRKD3O94806 890 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 AGR2O95994 175 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 GUSBP08236 651 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 PABPC4LP0CB38 370 aaKnown RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 UBTFL6P0CB48 400 aaPredicted RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 ENPP1P22413 925 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 IL12AP29459 219 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 S100A3P33764 101 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 CHI3L1P36222 383 aaPredicted RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 CCR4P51679 360 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 FUT5Q11128 374 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 SKP2Q13309 424 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 RNPS1Q15287 305 aaKnown RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 DPY19L1Q2PZI1 675 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 FAM174BQ3ZCQ3 159 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 TIGD2Q4W5G0 525 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 ATAD3BQ5T9A4 648 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 TYW3Q6IPR3 259 aaKnown RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 OGFOD2Q6N063 350 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 BEND4Q6ZU67 534 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 EIF3MQ7L2H7 374 aaKnown RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 FCRLAQ7L513 359 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 NUFIP2Q7Z417 695 aaKnown RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 SPATA19Q7Z5L4 167 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 STK32CQ86UX6 486 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 CXorf67Q86X51 503 aaPredicted RBP9.17□□□□□ -0.94
CLK3-205ENST00000561673 TUSC5Q8IXB3 177 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 WFDC11Q8NEX6 87 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 MGARPQ8TDB4 240 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 ZFP90Q8TF47 636 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 RAB8BQ92930 207 aa9.17□□□□□ -0.94
CLK3-205ENST00000561673 ROPN1LQ96C74 230 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms