RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 EFHD2Q96C19 240 aaPredicted RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 IQCDQ96DY2 449 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 PTCD3Q96EY7 689 aaKnown RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 CMTM7Q96FZ5 175 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 KCNS3Q9BQ31 491 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 EFCAB11Q9BUY7 163 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 RSPO3Q9BXY4 272 aaPredicted RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 ANKZF1Q9H8Y5 726 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 BEX1Q9HBH7 125 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 TIGARQ9NQ88 270 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 G6PC2Q9NQR9 355 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 IARS2Q9NSE4 1012 aaKnown RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 LYARQ9NX58 379 aaKnown RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 PAK5Q9P286 719 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 PRODH2Q9UF12 536 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 TESQ9UGI8 421 aaKnown RBP4.59□□□□□ -1.67
HERC1-213ENST00000561359 ZKSCAN5Q9Y2L8 839 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 PLLPQ9Y342 182 aa4.59□□□□□ -1.67
HERC1-213ENST00000561359 EXPH5Q8NEV8 1989 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 SH3PXD2BA1X283 911 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 NCF1BA6NI72 391 aaPredicted RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 TTC36A6NLP5 189 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 NCF1CA8MVU1 366 aaPredicted RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 J3QLI3 93 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 PLPP1O14494 284 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 PRODHO43272 600 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 TMPRSS11DO60235 418 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 TSPAN2O60636 221 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 PRAMEF4O60810 478 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 MPZL1O95297 269 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 OR4A8P0C604 315 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 FAM58BPP0C7Q3 252 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 ZSCAN5DPP0CG00 497 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 CPMP14384 443 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 NCF1P14598 390 aaPredicted RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 PORP16435 677 aaPredicted RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 COX5AP20674 150 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 EDNRAP25101 427 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 SFTPDP35247 375 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 CASP2P42575 452 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 SLC1A3P43003 542 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 HNMTP50135 292 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 PGGT1BP53609 377 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 PNLIPRP2P54317 469 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 HADHBP55084 474 aaKnown RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 MYBPC1Q00872 1141 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 IRF8Q02556 426 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 DDX39BQ13838 428 aaKnown RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 ZNF239Q16600 458 aaKnown RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 TMEM44Q2T9K0 475 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 RBM20Q5T481 1227 aaKnown RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 KPRPQ5T749 579 aaPredicted RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 PRAMEF9Q5VWM5 478 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 SAXO2Q658L1 398 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 OLFML2AQ68BL7 652 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 ACSM5Q6NUN0 579 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 SYT10Q6XYQ8 523 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 FRA10AC1Q70Z53 315 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 FCRLAQ7L513 359 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 CARM1Q86X55 608 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 ZCCHC7Q8N3Z6 543 aaKnown RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 CDYL2Q8N8U2 506 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 OR4F5Q8NH21 305 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 RNF138Q8WVD3 245 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 DVL3Q92997 716 aaPredicted RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 CPNE4Q96A23 557 aaPredicted RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 C1orf147Q96MC9 270 aaPredicted RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 SERPINB12Q96P63 405 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 GPA33Q99795 319 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 LRRC1Q9BTT6 524 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 JAM3Q9BX67 310 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 NAT10Q9H0A0 1025 aaKnown RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 PLK3Q9H4B4 646 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 NHEJ1Q9H9Q4 299 aaPredicted RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 PLAC1Q9HBJ0 212 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 DYNLRB1Q9NP97 96 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 CA10Q9NS85 328 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 C20orf96Q9NUD7 363 aaPredicted RBP4.58□□□□□ -1.68
HERC1-213ENST00000561359 TAS2R16Q9NYV7 291 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 KLHL9Q9P2J3 617 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 OR10H1Q9Y4A9 318 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 ASB4Q9Y574 426 aa4.58□□□□□ -1.68
HERC1-213ENST00000561359 IGHV3-15A0A0B4J1V0 119 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 TCRBV7S2A1N4TA0A589 114 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 TCRBV5S2A0A599 114 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 NPEPPSL1A6NEC2 478 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 SMTNL1A8MU46 457 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 hCG_2039718K7EN88 272 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 WNT9BO14905 357 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 PHGDHO43175 533 aaKnown RBP4.57□□□□□ -1.68
HERC1-213ENST00000561359 NME6O75414 186 aaPredicted RBP4.57□□□□□ -1.68
HERC1-213ENST00000561359 IGHV3-9P01782 118 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 GBAP04062 536 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 CRYBA1P05813 215 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 CT45A8P0DMV1 189 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 CT45A9P0DMV2 189 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 CLK3P49761 638 aaKnown RBP4.57□□□□□ -1.68
HERC1-213ENST00000561359 EMDP50402 254 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 RAG2P55895 527 aa4.57□□□□□ -1.68
HERC1-213ENST00000561359 LMO4P61968 165 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms