RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 FNDC9Q8TBE3 224 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 POC1BQ8TC44 478 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 GPR119Q8TDV5 335 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 SLC38A5Q8WUX1 472 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 FIG4Q92562 907 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 REXO5Q96IC2 774 aaKnown RBP9.12□□□□□ -0.95
HERC1-212ENST00000561348 TM9SF2Q99805 663 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 ELAC2Q9BQ52 826 aaKnown RBP9.12□□□□□ -0.95
HERC1-212ENST00000561348 LAT2Q9GZY6 243 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 SLC38A1Q9H2H9 487 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 CALHM2Q9HA72 323 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 POLE3Q9NRF9 147 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 RLIMQ9NVW2 624 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 SLC25A37Q9NYZ2 338 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 CALML5Q9NZT1 146 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 VAPAQ9P0L0 249 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 ICAM5Q9UMF0 924 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 ZNF232Q9UNY5 417 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 SLC35A3Q9Y2D2 325 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 AP4B1Q9Y6B7 739 aa9.12□□□□□ -0.95
HERC1-212ENST00000561348 A0A1W2PNR3 127 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 LINC01387J3KSC0 135 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 AP3D1O14617 1153 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 HNRNPRO43390 633 aaKnown RBP9.11□□□□□ -0.95
HERC1-212ENST00000561348 DBIP07108 87 aaKnown RBP9.11□□□□□ -0.95
HERC1-212ENST00000561348 ZNF17P17021 662 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 PRKCAP17252 672 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 CTSSP25774 331 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 SHC1P29353 583 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 TIMP3P35625 211 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 EIF1P41567 113 aaKnown RBP9.11□□□□□ -0.95
HERC1-212ENST00000561348 KCNJ5P48544 419 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 ZNF136P52737 540 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 SEC24CP53992 1094 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 SUMO3P55854 103 aaPredicted RBP9.11□□□□□ -0.95
HERC1-212ENST00000561348 CARD18P57730 90 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 SESN3P58005 492 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 MTPNP58546 118 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 RAC1P63000 192 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 TXNL4AP83876 142 aaKnown RBP9.11□□□□□ -0.95
HERC1-212ENST00000561348 KLF10Q13118 480 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 SKP2Q13309 424 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 LARS2Q15031 903 aaKnown RBP9.11□□□□□ -0.95
HERC1-212ENST00000561348 BCL2A1Q16548 175 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 GLYR1Q49A26 553 aaPredicted RBP9.11□□□□□ -0.95
HERC1-212ENST00000561348 MRPL2Q5T653 305 aaKnown RBP9.11□□□□□ -0.95
HERC1-212ENST00000561348 LCE2DQ5TA82 110 aaPredicted RBP9.11□□□□□ -0.95
HERC1-212ENST00000561348 METTL21CQ5VZV1 264 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 CPLX4Q7Z7G2 160 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 CADM2Q8N3J6 435 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 OR10D3Q8NH80 312 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 OR2V1Q8NHB1 315 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 RNF217Q8TC41 542 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 TMEM234Q8WY98 164 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 ROBO4Q8WZ75 1007 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 OSTF1Q92882 214 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 WNT2BQ93097 391 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 ZDHHC16Q969W1 377 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 LRRC46Q96FV0 321 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 KLHL15Q96M94 604 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 OR5B2Q96R09 309 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 TREX2Q9BQ50 279 aaPredicted RBP9.11□□□□□ -0.95
HERC1-212ENST00000561348 SERINC1Q9NRX5 453 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 ARMCX1Q9P291 453 aa9.11□□□□□ -0.95
HERC1-212ENST00000561348 MCTS1Q9ULC4 181 aaKnown RBP9.11□□□□□ -0.95
HERC1-212ENST00000561348 GPC6Q9Y625 555 aaPredicted RBP9.11□□□□□ -0.95
HERC1-212ENST00000561348 HEATR5AQ86XA9 2040 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 CACNA1DQ01668 2161 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 IGHV3-15A0A0B4J1V0 119 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 A0A0J9YW62 118 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 MBD3L4A6NDZ8 208 aaPredicted RBP9.1□□□□□ -0.95
HERC1-212ENST00000561348 MBD3L3A6NE82 208 aaPredicted RBP9.1□□□□□ -0.95
HERC1-212ENST00000561348 AGAP5A6NIR3 686 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 MBD3L5A6NJ08 208 aaPredicted RBP9.1□□□□□ -0.95
HERC1-212ENST00000561348 FRS3O43559 492 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 TFPTP0C1Z6 253 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 PPIBP23284 216 aaKnown RBP9.1□□□□□ -0.95
HERC1-212ENST00000561348 SLC6A2P23975 617 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 CEACAM8P31997 349 aaPredicted RBP9.1□□□□□ -0.95
HERC1-212ENST00000561348 OPRM1P35372 400 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 PGM1P36871 562 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 MVDP53602 400 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 CTBP2P56545 445 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 GNGT1P63211 74 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 EXOC3L2Q2M3D2 409 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 SLC25A35Q3KQZ1 300 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 ZNF311Q5JNZ3 666 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 ZNF836Q6ZNA1 936 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 GGNQ86UU5 652 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 RETREG3Q86VR2 466 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 SNX32Q86XE0 403 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 MSRB3Q8IXL7 192 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 POU5F2Q8N7G0 328 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 RELL2Q8NC24 303 aaPredicted RBP9.1□□□□□ -0.95
HERC1-212ENST00000561348 MBD3L2Q8NHZ7 208 aaPredicted RBP9.1□□□□□ -0.95
HERC1-212ENST00000561348 SLC39A3Q9BRY0 314 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 SAR1AQ9NR31 198 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 CTPS2Q9NRF8 586 aa9.1□□□□□ -0.95
HERC1-212ENST00000561348 THUMPD1Q9NXG2 353 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms