RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ZNF229Q9UJW7 825 aa1.81□□□□□ -2.12
RTF1-207ENST00000561076 AGO1Q9UL18 857 aaKnown RBP1.81□□□□□ -2.12
RTF1-207ENST00000561076 FAF1Q9UNN5 650 aaPredicted RBP1.81□□□□□ -2.12
RTF1-207ENST00000561076 PRG3Q9Y2Y8 225 aaPredicted RBP1.81□□□□□ -2.12
RTF1-207ENST00000561076 GMPPBQ9Y5P6 360 aa1.81□□□□□ -2.12
RTF1-207ENST00000561076 MROH7-TTC4A0A0A0MT08 1334 aa1.81□□□□□ -2.12
RTF1-207ENST00000561076 INSRP06213 1382 aa1.81□□□□□ -2.12
RTF1-207ENST00000561076 AQRO60306 1485 aaKnown RBP eCLIP1.81□□□□□ -2.123e-6■■□□□ 12.1
RTF1-207ENST00000561076 FGD5Q6ZNL6 1462 aa1.81□□□□□ -2.12
RTF1-207ENST00000561076 A0A1W2PPI3 338 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 A0A1W2PRF3 423 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 A0A1W2PRM7 423 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 GOLGA8IPA6NC78 632 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 OR5H15A6NDH6 313 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 MGAT4DA6NG13 374 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 A8MX80 341 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 HHLA1C9JL84 531 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 E7ENQ6 273 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 PDLIM1O00151 329 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 FCN1O00602 326 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 RFXANKO14593 260 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 ZNF195O14628 629 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 IMPA2O14732 288 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 MID1O15344 667 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 SIGLEC5O15389 551 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 TAPBPO15533 448 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 P2RX6O15547 441 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 ZW10O43264 779 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 AIREO43918 545 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 PFKFB2O60825 505 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 RAMP3O60896 148 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 NOL4O94818 638 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 AHSA1O95433 338 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 TMEM50AO95807 157 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 RHOCP08134 193 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 HOXC6P09630 235 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 UBTFL1P0CB47 393 aaPredicted RBP1.8□□□□□ -2.12
RTF1-207ENST00000561076 CALM1P0DP23 149 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 CALM2P0DP24 149 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 CALM3P0DP25 149 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 NR2C1P13056 603 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 GP1BBP13224 206 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 PRF1P14222 555 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 PSMC3P17980 439 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 WT1P19544 449 aaPredicted RBP1.8□□□□□ -2.12
RTF1-207ENST00000561076 SERPINA2P20848 420 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 SYT1P21579 422 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 KITLGP21583 273 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 ITGB7P26010 798 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 DCKP27707 260 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 IL12AP29459 219 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 TSFMP43897 325 aaKnown RBP1.8□□□□□ -2.12
RTF1-207ENST00000561076 BDKRB1P46663 353 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 KCNJ3P48549 501 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 HOXA1P49639 335 aaPredicted RBP1.8□□□□□ -2.12
RTF1-207ENST00000561076 STK19P49842 368 aaPredicted RBP1.8□□□□□ -2.12
RTF1-207ENST00000561076 BACE1P56817 501 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 CLDN18P56856 261 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 RPL27P61353 136 aaKnown RBP1.8□□□□□ -2.12
RTF1-207ENST00000561076 TSPAN5P62079 268 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 BTG1P62324 171 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 VSNL1P62760 191 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 CTAG1AP78358 180 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 MRPS22P82650 360 aaKnown RBP1.8□□□□□ -2.12
RTF1-207ENST00000561076 MRPS25P82663 173 aaKnown RBP1.8□□□□□ -2.12
RTF1-207ENST00000561076 DR1Q01658 176 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 NHLH1Q02575 133 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 PLOD1Q02809 727 aaPredicted RBP1.8□□□□□ -2.12
RTF1-207ENST00000561076 MFGE8Q08431 387 aaPredicted RBP1.8□□□□□ -2.12
RTF1-207ENST00000561076 ZNF155Q12901 538 aaPredicted RBP1.8□□□□□ -2.12
RTF1-207ENST00000561076 FOXF2Q12947 444 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 STX5Q13190 355 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 SNTA1Q13424 505 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 ART3Q13508 389 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 GK3PQ14409 553 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 ICAM4Q14773 271 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 KIR2DS3Q14952 304 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 PON2Q15165 354 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 CDSNQ15517 529 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 ZNF74Q16587 644 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 CNPY1Q3B7I2 92 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 HSDL1Q3SXM5 330 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 SLC25A52Q3SY17 297 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 ACCSLQ4AC99 568 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 KLHL22Q53GT1 634 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 EIPR1Q53HC9 387 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 XKR6Q5GH73 641 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 SIRPB2Q5JXA9 342 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 EOGTQ5NDL2 527 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 DCST2Q5T1A1 773 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 MEDAGQ5VYS4 303 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 NEPROQ6NW34 567 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 FAHD2BQ6P2I3 314 aaPredicted RBP1.8□□□□□ -2.12
RTF1-207ENST00000561076 RHBDF2Q6PJF5 856 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 Q6YL49 198 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 PID1Q7Z2X4 250 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 ISCA2Q86U28 154 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 ITIH5Q86UX2 942 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 PIGZQ86VD9 579 aa1.8□□□□□ -2.12
RTF1-207ENST00000561076 SLC26A11Q86WA9 606 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms