RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 POC1BQ8TC44 478 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 PHF10Q8WUB8 498 aaKnown RBP8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 TMEM234Q8WY98 164 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 ST8SIA1Q92185 356 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 CNOT9Q92600 299 aaKnown RBP8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 SH3YL1Q96HL8 342 aaPredicted RBP8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 MRGPRX4Q96LA9 322 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 UCN2Q96RP3 112 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 KLHDC3Q9BQ90 382 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 VKORC1Q9BQB6 163 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 TP63Q9H3D4 680 aaPredicted RBP8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 ARMC7Q9H6L4 198 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 EXO5Q9H790 373 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 ACER3Q9NUN7 267 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 NDE1Q9NXR1 346 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 TMEM181Q9P2C4 612 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 SLC6A5Q9Y345 797 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 AP4B1Q9Y6B7 739 aa8.71□□□□□ -1.02
RABGGTA-221ENST00000561055 ELOVL7A1L3X0 281 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 FAM47E-STBD1D6RA91 191 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 M0QX08 132 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 NME4O00746 187 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ADAM11O75078 769 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 EPPINO95925 133 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 TPOP07202 933 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 UBTFL6P0CB48 400 aaPredicted RBP8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 T-ENOLP0DO92 83 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ESRRAP11474 423 aaPredicted RBP8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF708P17019 499 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 CALB2P22676 271 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ELK4P28324 431 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ACAA2P42765 397 aaKnown RBP8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 SLC7A2P52569 658 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 CRYBA2P53672 197 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 CASP6P55212 293 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 CLDN18P56856 261 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 RAC1P63000 192 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 KCNC4Q03721 635 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 SRSF1Q07955 248 aaKnown RBP eCLIP8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 EPS8Q12929 822 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 QPRTQ15274 297 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 SF3B4Q15427 424 aaKnown RBP eCLIP8.7□□□□□ -1.023e-9■■■■□ 22.6
RABGGTA-221ENST00000561055 TOMM34Q15785 309 aaPredicted RBP8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 FXNQ16595 210 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 NDUFAF6Q330K2 333 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 SPATS1Q496A3 300 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 DCST1Q5T197 706 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 MTFR2Q6P444 385 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF836Q6ZNA1 936 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 TRPM8Q7Z2W7 1104 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF550Q7Z398 422 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 HMGN2P46Q86SG4 172 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ADGRE4PQ86SQ3 457 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 MICU2Q8IYU8 434 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 PGAM4Q8N0Y7 254 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 CLIP4Q8N3C7 705 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 OR2T12Q8NG77 320 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 PRR7Q8TB68 274 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ZPLD1Q8TCW7 415 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 RASSF5Q8WWW0 418 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF524Q96C55 264 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 NSL1Q96IY1 281 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 SFXN2Q96NB2 322 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 DMRTA2Q96SC8 542 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 NPAS1Q99742 590 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 PINK1Q9BXM7 581 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ADAM19Q9H013 955 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 SPAG4Q9NPE6 437 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 PNPLA3Q9NST1 481 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 RLIMQ9NVW2 624 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 STOML1Q9UBI4 398 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ACAD8Q9UKU7 415 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 VDAC3Q9Y277 283 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 SLC5A6Q9Y289 635 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNF337Q9Y3M9 751 aa8.7□□□□□ -1.02
RABGGTA-221ENST00000561055 USP9XQ93008 2570 aaPredicted RBP8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 HECTD1Q9ULT8 2610 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 CFAP73A6NFT4 308 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 CCT8L1PA6NM43 557 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 FIGNL2A6NMB9 653 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 SYT5O00445 386 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 ADAMDEC1O15204 470 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 ZNHIT1O43257 154 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 EFNA2O43921 213 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 TPST1O60507 370 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 NUDT14O95848 222 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 LGI1O95970 557 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 HSD17B1P14061 328 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 FKBP2P26885 142 aaKnown RBP8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 ACVR2AP27037 513 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 HTR1EP28566 365 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 KDELR2P33947 212 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 CPOXP36551 454 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 APOBEC1P41238 236 aaKnown RBP8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 KCNJ5P48544 419 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 MAP2K6P52564 334 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 CLDN15P56746 228 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 SESN3P58005 492 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 LIPEQ05469 1076 aa8.69□□□□□ -1.02
RABGGTA-221ENST00000561055 DMTNQ08495 405 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms